LOCUS BC041483 2077 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens beaded filament structural protein 1, filensin, mRNA
(cDNA clone MGC:50330 IMAGE:5406467), complete cds.
ACCESSION BC041483
VERSION BC041483.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2077)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2077)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 87 Row: p Column: 14.
FEATURES Location/Qualifiers
source 1..2077
/db_xref="H-InvDB:HIT000052559"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50330 IMAGE:5406467"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2077
/gene="BFSP1"
/gene_synonym="CP115"
/gene_synonym="CP94"
/gene_synonym="FILENSIN"
/gene_synonym="LIFL-H"
/db_xref="GeneID:631"
/db_xref="MIM:603307"
CDS 272..1894
/gene="BFSP1"
/gene_synonym="CP115"
/gene_synonym="CP94"
/gene_synonym="FILENSIN"
/gene_synonym="LIFL-H"
/codon_start=1
/product="BFSP1 protein"
/protein_id="AAH41483.1"
/db_xref="GeneID:631"
/db_xref="MIM:603307"
/translation="MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQFLQDDI
SAAKDRHKKNLLEVQTYISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEE
GREVLSHLQAQRVELQAQTTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVL
EKSSYDCRQLAVAQQTLKNELDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTG
SGGKDLTRALQDITAAKPRQKALPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQ
VVLKEESESKFESESKEVSPLTQEGAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPE
TPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDSVLYDGQVEPSPESP
KPPLENGQVGLQEKEDGQPIDQQPIDKEIEPDGAELEGPEEKREGEERDEESRRPCAM
VTPGAEEPSIPEPPKPAADQDGAEVLGTRSRSLPEKGPPKALAYKTVEVVESIEKIST
ESIQTYEETAVIVETMIGKTKSDKKKSGEKSS"
misc_feature 275..853
/gene="BFSP1"
/gene_synonym="CP115"
/gene_synonym="CP94"
/gene_synonym="FILENSIN"
/gene_synonym="LIFL-H"
/note="filament; Region: Intermediate filament protein"
/db_xref="CDD:pfam00038"
BASE COUNT 613 a 468 c 572 g 424 t
ORIGIN
1 aattttccat gctggaagtg gaaggaattg cttgctcatt tatattctct atcctgtgga
61 aagccttccc tcccacccct tgagccagtg agtcacttcc tctctgcaaa cctctaaagc
121 ctcctttctt tctcagccca gacctggccc tctggagagg gttttggagt cctgggtagg
181 cagggtacct caggcagcag gcagcacacc ttggatgtga gctgaatgga ttttcaaatt
241 tcacagaagg agcctccatg ctggagaaag tatgtatgaa aatgagtgcg aatgtcaact
301 cctgctaaaa gaaatgcttg aacggcttaa caaggaagct gatgaagcct tgctgcataa
361 cctacgcctt cagctggaag cccaatttct gcaagatgat atcagtgcgg caaaggacag
421 gcacaagaag aatcttctgg aagttcagac ctatatcagc atcctgcagc agatcatcca
481 caccactcct ccagcatcca ttgtgacgag tgggatgagg gaggagaagc tcctgacgga
541 gcgggaggtg gccgccctgc ggagtcagct ggaggagggc cgggaggtgc tctcccacct
601 gcaggcgcag agagtggagc tgcaggcaca gacaacaact ctggaacaag ctattaaaag
661 tgcccatgag tgttatgacg atgagattca gctttataac gagcagattg agacactgcg
721 caaggagatt gaggagacag agcgggtcct ggagaagtct tcttacgact gccggcagct
781 ggcggtcgcc cagcaaaccc tgaagaatga gctggaccgg tatcatcgta tcatcgagat
841 tgaaggcaac aggctgacct ctgccttcat tgaaactccc attcccctgt tcacccagag
901 ccatggagtc tctctcagca ctggatccgg tgggaaagat cttaccagag ctctgcagga
961 tataacagca gcaaaaccaa gacaaaaagc cctccccaag aatgttccaa ggagaaaaga
1021 gattataaca aaagacaaaa ccaacggagc tctggaagat gcaccattaa aaggtttgga
1081 agacacaaag ctggtacagg tggtacttaa agaggaaagt gaatctaagt ttgaatcaga
1141 aagtaaagaa gtaagtcccc tgacacaaga aggggctcca gaggatgtgc cagatggagg
1201 gcagataagc aaaggctttg ggaaactata caggaaggtc aaggagaaag tgagaagccc
1261 caaagagcct gagaccccca ctgagctcta caccaaagag cggcacgtgc tggtcacagg
1321 ggatgccaat tacgtggacc ctagattcta tgtctcctcc atcacagcta aaggtggggt
1381 ggctgtttct gttgcggaag actctgtgct ttatgacggc caggtggagc cctctcctga
1441 gtcacccaag ccccctttag agaatgggca ggtgggtctg caggagaaag aagatggaca
1501 accaattgac cagcagccta tagacaagga gattgagcca gatggtgcag agctggaagg
1561 ccctgaagag aaacgtgagg gtgaggagcg ggacgaagag tccaggagac cctgtgccat
1621 ggtcacaccc ggtgcagagg aaccgtctat acctgagcct ccaaagcctg cggctgatca
1681 ggatggagct gaggtgcttg ggactaggag cagaagcctg ccagaaaaag gccctcccaa
1741 ggctttggcc tataagacag tggaagtggt ggaatctatc gagaagattt ccacggagag
1801 cattcagaca tatgaagaaa ccgctgtgat cgtggagacc atgattggaa agacaaagtc
1861 agacaagaag aaatcaggag agaagagctc ttaaaatgcc caggcttgat gggataaaat
1921 gtatttgggg ccactgtagg ggtaatgctt tgatatttta gagcaaatga taaaagggtg
1981 agggttcctg tttggattag accatagttg acccatctgg cattgccaac gaagccttca
2041 ttaaaatgtt ttctttgctt gcaaaaaaaa aaaaaaa
//