LOCUS BC041392 3211 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens family with sequence similarity 123A, mRNA (cDNA clone
MGC:43973 IMAGE:5277030), complete cds.
ACCESSION BC041392
VERSION BC041392.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3211)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: j Column: 5.
FEATURES Location/Qualifiers
source 1..3211
/db_xref="H-InvDB:HIT000096664"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43973 IMAGE:5277030"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3211
/gene="FAM123A"
/db_xref="GeneID:219287"
/db_xref="HGNC:HGNC:26360"
CDS 674..2137
/gene="FAM123A"
/codon_start=1
/product="FAM123A protein"
/protein_id="AAH41392.1"
/db_xref="GeneID:219287"
/db_xref="HGNC:HGNC:26360"
/translation="METSRSRGGGGAVSERGGAGASVGVCRRKAEAGAGTGTLAADMD
LHCDCAAETPAAEPPSGKINKAAFKLFKKRKSGGTMPSIFGVKNKGDGKSSGPTGLVR
SRTHDGLAEVLVLESGRKEEPRGGGDSGGGGGGRPNPGPSRAAGPGGGSLASSSVAKS
HSFFSLLKKNGRSENGKGEPVDASKAGGKQKRGLRGLFSGMRWHRKDKRAKAEAAEGR
APGGGLILPGSLTASLECVKEETPRAAREPEEPSQDAPRDPAGEPAGGEEVPAPADRA
PARSCREAEGLAHAGDTGARGEDAAGHRRAEPGPGEVRTAEDASRTGAVPVKTVPLVD
SEGGSGRAPAAPDPASVDPPSDPSADRICLMFSDVTSLKSFDSLTGCGDIIADQEEEA
GPSCDKHVPGPGKPALSKKNPGVVAYQEAGKRWPARTRWTTPIYRSSGTCSPRPRSRD
PSPRRARLRWQLRWKPRWCPRPPKTPGVWKRPRTRPR"
BASE COUNT 737 a 891 c 1035 g 548 t
ORIGIN
1 agcgtggcga actccacccc ggggagctgt tgtgcttgca ttgctgggct gctgatagac
61 tgattgagtg gtggcgtgta cttttgtcac aagaaccata accacaatga cagccacaca
121 gcatggacct agcgtgtgct cagctctgga caagacatgg atgtaggcag acatgcttcc
181 tgcctgctgg gcttagtgca ccaatgctaa ggacagacat gaagggcttg ggaaaggcat
241 gaagatgcag ggagtctagg agagaggata agaaaaacaa gcattttgtg gtgggttgaa
301 ttgcgttgtc gtttttagag gcatttcgtg atccatggtt gcgctcccgt gaagagcgag
361 tctagagaag gaatccgaag gtgggtgaga gttgagggaa tttgaattcc ataattacga
421 ctcgaatttc tgcaatcagc tcgcggctgt gttgcctgct cctgccacaa aaacgccatg
481 cagcgccgag ccaagtcgga tggaagtggg ttagggtatt atataagccc ttgcgggagg
541 gaagatggtc ttttatgtgt gtttcttttg cagcggcggc ggcgagcgcg gctcaggttg
601 atttagaata cgggtgacag tggcctggcg cgagcccact gctgacgaaa gcggcttatc
661 ccgcgcggtt tccatggaga cgagccggag ccgcggcggc ggcggggctg tcagcgagcg
721 cggcggagct ggcgcgtccg tgggggtctg caggaggaag gcggaggccg gggccgggac
781 cgggaccctc gcggcagaca tggacttgca ttgtgactgt gccgccgaaa cgccggccgc
841 cgagccgccg tcggggaaga ttaataaagc tgccttcaaa ttattcaaga agaggaaatc
901 gggtggcacc atgcccagca tttttggggt caaaaacaaa ggggacggga aaagctcggg
961 tccgacgggg ctggtgagga gcaggaccca cgacggactt gccgaggtgc tggtgctgga
1021 gagcggcagg aaggaggagc cgcgcggcgg gggcgacagc ggcgggggcg gcggggggcg
1081 gccgaacccg gggccctcca gagccgcagg gcccggcggg ggctccctcg ccagcagctc
1141 ggtggccaag tcgcacagct tcttctcgct gctgaagaag aacgggcgct cggaaaacgg
1201 caagggagag cctgtggacg cgagcaaggc cggcggcaaa caaaagcggg ggctgcgggg
1261 gctgttcagc ggcatgcgct ggcacaggaa agacaagcgg gccaaggcgg aggccgcgga
1321 ggggcgcgcg cccgggggcg gcttgatcct acccggctcg ctcaccgcca gcctggagtg
1381 cgtcaaggag gagacgccca gagccgcgcg cgagccggag gagcccagcc aggacgcccc
1441 gcgagaccca gcaggtgagc ccgcaggggg agaggaggtg cccgcccccg ccgaccgcgc
1501 cccagcgcgg agctgccgag aggcagaggg cctcgcgcac gccggcgaca ccggcgcccg
1561 gggagaggac gccgcggggc atcggcgcgc cgagccgggg cccggggagg tccgcacggc
1621 agaggacgct tccaggacgg gggccgttcc cgtaaagacg gtcccccttg tcgactccga
1681 aggcggcagc ggccgggcgc ccgccgcccc agaccctgcc tctgtcgatc caccctcaga
1741 cccgtcggca gatcgtattt gtttgatgtt ttctgacgtg acttcactga aaagctttga
1801 ctctcttaca ggctgtggag atattattgc agaccaagag gaagaggcag gtcccagctg
1861 tgacaagcat gtccccgggc caggcaagcc ggctctgtct aaaaagaacc ccggcgtggt
1921 ggcctaccag gaggcgggga agagatggcc agcccggacg aggtggacga cacctatcta
1981 caggagttct gggacatgct ctcccagacc gaggagcagg gacccgagcc ccaggagggc
2041 gcggctaagg tggcagctgc gctggaaacc aaggtggtgc ccgagacccc caaagacacc
2101 aggtgtgtgg aagcggccaa ggacgcgtcc tcggtaagcg caggaggctc aaccggattc
2161 ccatcgagcc ccatcctaag gaggagccca agcacccgga ggaggagcag caggaaggcg
2221 tccccaacag cgacgagggc tactgggact ccaccacgcc aggcccagag gaagacagct
2281 cgagcagcgg gaagaaggcg ggcatccccc gggatagcta cagcggggac gcgctctatg
2341 atctctatgc tgacccggac ggaagtccag caacccttcc tggagggaag gacaacgagg
2401 agacgtcctc cctgtcccgg ttaaagcccg tatctccagg caccatcacc tgtccactgc
2461 gaacaccagg cagcttgctg aaggactcta agatccctat tagcatcaag cacctgacca
2521 accttccatc tagccatccc gtggtgcacc agcaaccctc caggagtgag atgcccagaa
2581 caaaaatccc ggtttccaaa gtgctggtcc gcagagtcag caaccggggc ttggctggga
2641 ccaccatcag agcaacggcc tgccacgaca gtgccaaaaa gttgtgaggt cttccaggcc
2701 aaggtggatg ggccccatgc caaggaatac aacttttccc tggaaaccac taaagtaagt
2761 tttgcttttc ctaaagaaag tcttttagga caccacccgt cccccgccct gctccagagc
2821 gtggaccgag gaggtctttg tgccctgagc agggaccgga taacaccaga aagagggatg
2881 ctacacgggg gtttctcctc tcaagataag tccctgagaa ttattttcaa gcactttttt
2941 cttttttacc tttaagtttt tcttcctttt gctttaatat actgaacact tggaagtcac
3001 ctttacttgc ctttgcagaa aacagaactt agtcaaacct aagtaagagt catgcctgga
3061 tattgggata agccagtgtc tagaggcctg aaggaaccgc tgaagaacca gaggagatct
3121 cctcttccaa gacacgtttc cttccttccc ttctttcctc tttcctttcc agttaaaaaa
3181 aaacaaaaac aaaaacaaaa aaaaaaaaaa a
//