LOCUS BC041372 4010 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens seven in absentia homolog 3 (Drosophila), mRNA (cDNA
clone IMAGE:5273845), partial cds.
ACCESSION BC041372
VERSION BC041372.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4010)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4010)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC041372.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: e Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38502311.
FEATURES Location/Qualifiers
source 1..4010
/db_xref="H-InvDB:HIT000096649"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5273845"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..4010
/gene="SIAH3"
/db_xref="GeneID:283514"
/db_xref="HGNC:HGNC:30553"
CDS <1..892
/gene="SIAH3"
/codon_start=2
/product="SIAH3 protein"
/protein_id="AAH41372.2"
/db_xref="GeneID:283514"
/db_xref="HGNC:HGNC:30553"
/translation="VAALLPGPKDSQLPPLPSRTNNPPKVVMLFFTQCFGAVLDLIHL
RFQHYKAKRVFSAAGQLVCVVNPTHNLKYVSSRRAVTQSAPEQGSFHPHHLSHHHCHH
RHHHHLRHHAHPHHLHHQEAGLHANPVTPCLCMCPLFSCQWEGRLEVVVPHLRQIHRV
DILQGAEIVFLATDMHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATMMLIG
TPTQADCFTYRLELNRNHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNG
SLAIGIAITATEVLPSEAEM"
BASE COUNT 980 a 1091 c 915 g 1024 t
ORIGIN
1 agtggctgcg ctccttccag ggcccaagga ctcacagctt cctccgctgc cttcccggac
61 caacaacccc ccaaaagttg tgatgctttt ctttacccag tgctttgggg ctgtattaga
121 tctcattcat ctccggtttc agcactacaa ggctaaacgg gttttctccg ctgccgggca
181 acttgtctgt gtcgtcaacc ccacacacaa cctaaagtat gtgtccagtc ggcgcgccgt
241 cactcagagc gctccagagc aaggcagctt ccaccctcac catctctccc accaccactg
301 ccaccaccgc caccaccacc acctccgcca ccacgcccac ccccaccacc ttcaccacca
361 ggaggcgggg ctgcacgcca acccggtgac gccctgcctg tgcatgtgtc ccttgttctc
421 ctgccagtgg gaaggccgcc tggaggtggt ggtgccccac ctgcggcaga tccatagggt
481 tgacatcctc cagggagccg agatcgtctt cctggccacg gacatgcacc tccccgcgcc
541 ggctgattgg atcatcatgc actcctgcct tggccaccac tttctgttgg tgctgaggaa
601 acaggagagg catgaagggc acccccagtt ctttgccacc atgatgctga ttgggacccc
661 cacccaggcc gactgcttca cctatcgcct ggagctcaac agaaaccatc ggcgcctcaa
721 gtgggaggcc acgccccggt ctgttcttga gtgcgtggac tcggtgatta cggacgggga
781 ctgcctcgtc ctcaacacct cgctggcaca gctcttctct gacaacggca gccttgccat
841 tgggattgcc atcaccgcga cagaggtcct cccctcagaa gctgaaatgt gaggccagga
901 gccacggatg ctccccacac agcctcccta ggaaacgcct gggacctccc aataccagga
961 ctccagactc ctttttattc ttctcctttc tttttttttt tttttaattt ttaattatta
1021 ttattttttt gtctcaggta ctttgtgaga tttagttttt gtctgccatg ggcattatat
1081 tatgtaaaca tcctgtaatt taagatcttg gtgtgatgtt tgtcctgcct tgttggtgtt
1141 gttttataga atgtttgtaa gatttattca gaatagtttt tttcctgtca cctccaagtc
1201 ctttctccgc tagttttgaa aggatcaaaa caccatcaag cagactgttg gggttgaaag
1261 gaggcttcgt gtgagaatca tttcttgttt ctcttttcag tctatttcag agcaagctaa
1321 atctgaacgt gtgcagtcgg caggttgggg aaggggccca gctcagagat ggatcacatt
1381 tcagaccatc cagacatgac tctgacagct tcccaggaac ctcaaggtca aagctgagct
1441 agccgggcat gaggagatcg tgtctccacc gcagggctgg ggactgggct agaggtgtca
1501 ttgtgtgctg agtgctcagg ttgatgctgg ggctcaggag agtagtcaga ggcccacctt
1561 cctgtgacgg gctcttgtca ccttgttccc aggctgtgcc gtcttctcct gctctggaat
1621 caaagtcctc agatttttga tgctttctta aaaacccctt tgccttctgt tgagcaagta
1681 gtagaaaaga ataggcaaga tggggggtgg ggatgaaaag caacaggaaa aagagaacat
1741 aaaattaatc tcccatctct gagagggcac tccctcctca gagagtttta ttatcaagtt
1801 ataaaatcca tcagttcctc cctagggtgc agttctttca tatcatgcaa aaagcagaac
1861 caggactcat catcaaatgc aaagaactca gagggtggca cccaggatct ctgacctggc
1921 gggctggtca tcacttacaa acctgggagg ctctcttccc tttcctcact ttctaaaatg
1981 ctcctaccgt cccattcagc acgcagacgt gaccacggct caagtatgta ttcagcacct
2041 gttgcagtat gaatgacaca gtgacggaaa tccatatttc ctctgcgcag gctgctttct
2101 cttatttggt tgtcagaaca attcatcaac atcttcttgt agaagtctct cgtgtatttg
2161 aagaaagtca gcatgtttag tcaactttgt cttttctgtt ctaagttgga cacctataag
2221 ccttcccagt aggacctctt ctagctcctt tttatcgcat ttgtcccccc cctctggctg
2281 ctctccagac actgcagaag tcaggcaccc catccccagc acattcccat gacagccaaa
2341 tgggcctttg gccaaccaga cattactctc cgtgccctgt tcctgcacct caccccctcg
2401 gcttggtcct ggcaggcatc caagtgacta cttagtctca ggcaggttgc cctggctggc
2461 catctgcaat tttttctcca ccaaaaataa ctgatcctga aacacaacac ccttccccca
2521 acaactgggt taattctcca gccacttttg gtgccaactt acacccccac gcaccagaag
2581 ggaggtgcca gtcgatacaa gatttaataa cagaggctgc tctggtcaca cagtaatcgc
2641 tgggcccctg gggctgagac tgcattccgt cagagccctg agaggggcaa aaaacattgc
2701 cacagatgga ggcacatgtc agatgctgca gtcgcaaaaa aggattgggg cctgcgcatt
2761 ctttgagctc tcagatgccc tgccagggca ccagccaccc tcctccaatc acacagatgc
2821 ccaagaacac ctgaggctgg tccgtctgtg cgtggaaaga ctggctgtct tcctcctcac
2881 tgcatcccca atccccttcc cagaacctaa gacccccttg gctgtaagtc ttatgccttt
2941 agaagccaca ggtcctctcc tggtttttga gactcaacca ctttgaaagc atttgtgtag
3001 catcacaggt gctccagatc aacaaacaaa aacctcacta agaatataac taacattcac
3061 agggccttag ggctcctgca gacatcacct ttgccttctg gttgtgccaa gttacctgag
3121 ccacactggg aatgacttca ggttattttc actgcacaca agactgtatt atgaataagt
3181 gatcccagat gggagcttat atttttgttc ctagaaagct ttaggacaaa gcatgggaaa
3241 tgtattatta tcttccatct atggtgctcc ccaaaaggcc tctccatatc catatgtgaa
3301 gaactggaga agaaggagca aactaacaac caagaattgg gaataggaaa tggtaccagc
3361 agtttgtatt tgagcttcac agttcctgaa gggctctttg atttgagtct caggttaatc
3421 ctcattagta tcctcaatat actaacagaa tagaggttct aagacatgaa gtgatctttt
3481 caaggtcaca catcaggtgg ttagaccaca accaaaaccc agatcaactg actgcaaact
3541 tggtgttctt gaagtaagac tgatccgaaa tattcagcag tcttgccagc ttaccagtgg
3601 actgaggacc tgagaatcaa ctgagtcttt gtcctgggat agttgaggga gcagggagag
3661 aaagactgga gtagatttgc ttttagaagc atctctgctt taagaactag gccagggatg
3721 gtggctcacg tccataatcc caggactttg ggaggccaag gaaggaggat tgcttgagct
3781 caggagtttg agaccagcct gggcaatata gcgagacttc atttctacaa aaaaaaaaat
3841 cagctgggca tggtgacaca agcctatagt cttaactact cggaggccaa gacaggggga
3901 tggcttgagc ccaggaggtt gaggtcacag tgagctgtga ttgcaccact tgtaactcca
3961 gcctgggcaa cagagtgaga ccctatctct ttagaaaaaa aaaaaaaaaa
//