LOCUS BC041370 4358 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens kelch-like 8 (Drosophila), mRNA (cDNA clone
IMAGE:5273762), with apparent retained intron.
ACCESSION BC041370
VERSION BC041370.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: e Column: 19
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4358
/db_xref="H-InvDB:HIT000096647"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5273762"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1419 a 754 c 761 g 1424 t
ORIGIN
1 agcggtatga attgaaataa actgtttatt ttatgttgtg tattatgctc actacctggg
61 ttatagattc atttatacac caaacctcag catgatgcaa tatatctatg caacagacct
121 acacatgcac ccctaattct aaagtaaaag ttgaaaaaag caaaatatgt atatatattt
181 acaataaaag aaaaatataa atttaaaata aaaataaaac tgtaagaatg aaggaatagt
241 aaattatttt ttactttata aggggaaagg attataggct tattttatta ttttgagacg
301 gggtcttgct ctgtcgccca ggctggagtg cagtgatgcg gtcgtgggtc atggcagcct
361 ccacctcctg gacccaaacc ctactccacc ccctgagtag ctgagactac aggtgcacac
421 catcacaccc agttaatttt tgcacttttt gtagagaggg ggtttggcca tgttgcccgg
481 gctggtcttg aactcctgga ctcaagcgat ctgtctgcct cagcctccca aactgctggg
541 attacaggcg tgagccacca tgcctggcat ctagtaattt aaaaaatatt tccctttaca
601 tacagctttt aagaagcaca atgttatttt atttgtatat tatatataca ctcttcacta
661 ttcattttaa atacaaagca gatcttgaga tatgtagaaa cctaagccat ctttaaagtt
721 gaggatgttc ttatttataa aggttttcct ttacattctg atttcactat ttttgtaatt
781 ataactaaac tgtgatttgt tataactcat gatcacaaat tgagcatgta tctgtacctc
841 attaaaattg tatttagaca ttaaaaagaa aaagaaaaag aggccacaga tagctgctct
901 gtgccttcca ccatctgaag acacaaagaa gagttggcat cagtgaactt agagcaagtc
961 cttaccagac atggatttgc cagtgccttg atcttgaact ttctagtctc aagaactatg
1021 agaaataaat tatgttgttt atcagccacc cagtgatagt ttgttatagc agcctgaata
1081 gactaaacag taagcttttt tttttttttt aaagacagag tctcactctg tcacccaggc
1141 tggagtgcaa tggcacgatc ttggctcact gcaacctctg cctcccgggt tcaagcgatt
1201 cttccacgtc agccccccga gtagctggga ttataggcac ccaccatcat gctcagctaa
1261 tttttgtatt tttatagaga tggggtttca ccatgttggc caggctggtc ttgaactcct
1321 gacctcaggt gatccgccta ccttggcctc ccaaagtgct gggattacag gcatgagcca
1381 ctgcccctgg ccagtaggtt attttttatt ttgaagtatc aagattatta ttacctacaa
1441 agttatgcaa ctgtatatcc actataatag tatttacagt aatcaaaaag tcataatgta
1501 aatgtcgaaa caacattgaa atagtaatga ataatataca tgtagagtaa aagatattaa
1561 agaagatgct tgcataagtt gctaatgatg aatgttaaag tatattagag tagaagggca
1621 tttttcaact gatatggaaa attttcctgt atatataatg gttaataata ctaagataaa
1681 attttacttt ttctaaaatt cttttttttt tttttttttt gagatggagt ctcactctgt
1741 tgcccaggct ggagtgcagt ggcacaatct cagctcactg caacctctgc ctccgaggtt
1801 caagcgattc tcctgcctca gcctcccaag tagctgggac tacagacgcg tgccaccatg
1861 cccggctaat tttttttttt gtattttcag tatagacggg gtttcaccat gttagccagg
1921 atggtctcca tctcctgacc tcctgatccg ccctcctcgg tggatcccgc ccaaagtgct
1981 gggattacag gcgtgagctg cgcccggcct ttactaaact tttttaagtg aagtggagat
2041 agtttacaaa ataaatgtta actctttttt ttttcaatag caacaaaagc acagatttat
2101 tgaaatgaaa gtacactcca cagagtggga gcgggctcga gcaagtggca ctcgagccat
2161 gatgacgtcc taactagtgg agttaggaat gctttgtatg ttgatagtca agtgctttac
2221 taatccaaaa gccttatttt cattgtattt ccattcatat tggctaatct ctggaaaatt
2281 actcaaagtt tttattaata gttggtattt caagcttttt aaacaaaagt ctaaggaatc
2341 atttaatgaa tgttgatatt ctacatattt taatactgaa gtgtgacatg atttttccct
2401 gagtactgtt aagtttagcc tgaagctccc accttatgta ttttaaactt ggcctaaaag
2461 tttctctgta cacagtaaac tgtaacctaa ctggttgtgt aaacagactg caacctactc
2521 ttgtgctaat cactgaggtt cagccaatta aaggcaacca gttgttcaac ctgtgttcaa
2581 gtaaggctga ccctgagctg taactgaccc gtctgtttct gtacctcact tccgttttct
2641 gtgtgtcacc ttcctttttc tgtccgtaaa taattttcga ctatgcacca gcaccagtgt
2701 ctttgaacct attcttgttc caggactgcc caattcttga atccgtcttt gctcagttaa
2761 actccgttaa atttaattgt ctaaggtttt tctttcgtaa tactatcttg aattagtcac
2821 acgttcactg atctaacaaa gaaagaatgt aaattagaaa attaagtagt atcagggaca
2881 tatagtattt atataattct aaatacacgg taatgtctaa tattatgtag cttgtgtgtt
2941 tttcatccaa ttttaaacat caggtcttta gactttgatt cctttcattt tcaaatttct
3001 aatgaaatga ttttggtaat tggtaattat ttttttgtac cagagaaaga aaatgtacaa
3061 ataaactttc aggaatgtaa ttaactatat aacatcaaag gagaatcagt gcattaaaaa
3121 gccaaatttt tggctgttcc tatttataca tgtggcttaa agatctttat aaaataaaga
3181 tggatattta ttctaaaagg gtacataggg gtgtatgtgt taaatagcca cattttagtt
3241 tgtttgaatc aagactcaaa tggaattgta aagggacaga atcttattaa aaacaacatg
3301 aaaatgactt gccggccatt gatttgtaca gcttggatgg caagtgttaa aataatggtt
3361 atctagaaat tgtagaaccc tattttatga tactattatg taagagagtg ttggcaagtt
3421 atttaatgga gcaggtttaa gtcatgtgag acttacaaat atttgcatag aaactgaatc
3481 ccagtggtgg catgtggaaa taatttttta aaggatatgc ttaggctatt taaaagttat
3541 ttagtatcag atttcagatc ccattttaga gctgacgtga atttgaaaac atgccaagct
3601 ttatgttata gtctacatta caactttagt ctcaatggaa tctaaatact gccttgtgag
3661 ttctgtgaaa aaatttaata tagcataaca gacagaaatg attgtcttgt actttctgaa
3721 ataagtgata ctgcttcttc ctccacatta gtgaaaaaag actgaggaag gggcttttat
3781 aagcaaaacc atttatacat ttgaacactc taggagttgt cattttaaaa ttagttctca
3841 aataatgaga tacaactgtt tattatataa tcaaaacact acatgaaaac aggaaaactg
3901 ttaaaatagt actataactg ttacttgtat ttgattatta taaactcctg ggaaaatggg
3961 ataaatactg tattaaaaag aagatatctt cccactcagt accaaaaact tccagatgta
4021 agtaaaaatt taagtgtaaa acataaaacc ataaaagtag tataaaaaat acgtgaagta
4081 aatatagaat attagaatga ttcccatttc tagcaggtac ctaaaacaat aaataaaaag
4141 acttcattta attacataaa aatccatagg gtttttatat aagagaataa aatttgaaag
4201 caaactaaaa gagaagtttg aaatatatat gacaaatgcc taatactctg attatatgat
4261 gagtacttat aaataaaaaa tttgtagttc atagaagaaa tacaaatagc tcaaaattta
4321 taaatgattc aatcttaaga gcaaaaaaaa aaaaaaaa
//