LOCUS BC041158 1833 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens cytochrome P450, family 4, subfamily A, polypeptide 11, mRNA (cDNA clone MGC:48730 IMAGE:5183289), complete cds. ACCESSION BC041158 VERSION BC041158.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1833) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1833) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: d Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13435387. FEATURES Location/Qualifiers source 1..1833 /db_xref="H-InvDB:HIT000052527" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48730 IMAGE:5183289" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1833 /gene="CYP4A11" /gene_synonym="CP4Y" /gene_synonym="CYP4A2" /gene_synonym="CYP4AII" /db_xref="GeneID:1579" /db_xref="MIM:601310" CDS 32..1399 /gene="CYP4A11" /gene_synonym="CP4Y" /gene_synonym="CYP4A2" /gene_synonym="CYP4AII" /codon_start=1 /product="CYP4A11 protein" /protein_id="AAH41158.1" /db_xref="GeneID:1579" /db_xref="MIM:601310" /translation="MSVSVLSPSRLLGDVSGILQAASLLILLLLLIKAVQLYLHRQWL LKALQQFPCPPSHWLFGHIQELQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDP DYMKVILGRSDPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVG LMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSHQGSIQVDRNSQSYI QAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQK EGELEKIKRKRHLDFLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWIL YALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRE LSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPF SGGSR" misc_feature 236..1396 /gene="CYP4A11" /gene_synonym="CP4Y" /gene_synonym="CYP4A2" /gene_synonym="CYP4AII" /note="p450; Region: Cytochrome P450. Cytochrome P450s are involved in the oxidative degradation of various compounds. Particularly well known for their role in the degradation of environmental toxins and mutagens. Structure is mostly alpha, and binds a heme cofactor" /db_xref="CDD:pfam00067" BASE COUNT 497 a 484 c 442 g 410 t ORIGIN 1 gggcactcag agatccagca ggtgctgcac catgagtgtc tctgtgctga gccccagcag 61 actcctgggt gatgtctctg gaatcctcca agcggcctcc ctgctcattc tgcttctgct 121 gctgatcaag gcagttcagc tctacctgca caggcagtgg ctgctcaaag ccctccagca 181 gttcccgtgc cctccctccc actggctctt cgggcacatc caggagctcc aacaggacca 241 ggagctacaa cggattcaga aatgggtgga gacattccca agtgcctgtc ctcattggct 301 atggggaggc aaagttcgtg tccagctcta tgaccctgac tatatgaagg tgattctggg 361 gagatcagac ccgaaatccc atggttccta cagattcctg gctccatgga ttgggtacgg 421 cttgctcctg ttgaatgggc agacatggtt ccagcatcga cggatgctga ccccagcctt 481 ccactatgac atcctgaagc cctatgtggg gctcatggca gactctgtac gagtgatgct 541 ggacaaatgg gaagagctcc ttggccagga ttcccctctg gaggtctttc agcacgtctc 601 cttgatgacc ctggacacca tcatgaagtg tgccttcagc catcagggca gcatccaggt 661 ggacaggaat tctcagtcct acatacaggc cattagtgac ctgaacaacc tggttttttc 721 ccgtgtgagg aatgcctttc accagaatga caccatctac agcctgacct ctgctggccg 781 ctggacacac cgcgcctgcc agctggccca tcagcacaca gaccaagtga tccaactgag 841 gaaggctcaa ctacagaagg agggggagct ggagaagatc aagaggaaga ggcatttgga 901 ttttctggat atcctcctct tggccaaaat ggagaatggg agcatcttgt cagacaagga 961 cctccgtgct gaggtggaca cgttcatgtt tgagggccac gacaccacag ccagtgggat 1021 ctcctggatc ctctatgctc tggccacaca ccccaagcat caggagaggt gccgggagga 1081 gatccacagc ctcctgggtg atggagcctc catcacctgg aaccacctgg accagatgcc 1141 ctacaccacc atgtgcatta aggaggcact gaggctctac ccaccggtgc caggcattgg 1201 cagagagctc agcactcccg tcaccttccc tgatgggcgc tccttgccca aaggtatcat 1261 ggtcctcctc tccatttatg gccttcacca caacccaaaa gtgtggccca acccagaggt 1321 gtttgaccct ttccgttttg caccgggttc tgctcaacac agccacgctt tcctgccctt 1381 ctcaggagga tcaaggtgag acgtcctgtg tggtaattcg aatagaggaa tgagggaagt 1441 ctctggtcaa ccctctgatc tttgtgagcc tgatgttcat atgtggcatc ttcaggtgtg 1501 ctcttaaatg ttggtatttg tgggaaagtc aggcacctgg tgtgggcgtc tctgtgtaca 1561 aaaggaaggt ggcattcaga gcaccccatg gagactttgc tccctctgct tcttcaaatg 1621 ggcagcctga attcactgtc agtgcatgtt ccaaacttca gtatattcat gtattttcct 1681 cactttaagg atatgaattc tcaaaattag atattctcca gtaaaaaaaa aaaaaaaaaa 1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //