LOCUS BC041130 3186 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FCH domain only 1, mRNA (cDNA clone MGC:47796
IMAGE:5757146), complete cds.
ACCESSION BC041130
VERSION BC041130.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: k Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29789053.
FEATURES Location/Qualifiers
source 1..3186
/db_xref="H-InvDB:HIT000052516"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47796 IMAGE:5757146"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3186
/gene="FCHO1"
/gene_synonym="KIAA0290"
/db_xref="GeneID:23149"
/db_xref="HGNC:HGNC:29002"
CDS 234..2903
/gene="FCHO1"
/gene_synonym="KIAA0290"
/codon_start=1
/product="FCH domain only 1"
/protein_id="AAH41130.1"
/db_xref="GeneID:23149"
/db_xref="HGNC:HGNC:29002"
/translation="MSYFGEHFWGEKNHGFEVLYHSVKQGPISTKELADFIRERATIE
ETYSKAMAKLSKLASNGTPMGTFAPLWEVFRVSSDKLALCHLELTRKLQDLIKDVLRY
GEEQLKTHKKCKEEVVSTLDAVQVLSGVSQLLPKSRENYLNRCMDQERLRRESTSQKE
MDKAETKTKKAAESLRRSVEKYNSARADFEQKMLDSALRFQAMEETHLRHMKALLGSY
AHSVEDTHVQIGQVHEEFKQNIENVSVEMLLRKFAESKGTGREKPGPLDFEAYSAAAL
QEAMKRLRGAKAFRLPGLSRREREPEPPAAVDFLEPDSGTCPEVDEEGFTVRPDVTQN
STAEPSRFSSSDSDFDDEEPRKFYVHIKPAPARAPACSPEAAAAQLRATAGSLILPPG
PGGTMKRHSSRDAAGKPQRPRSAPRTSSCAERLQSEEQVSKNLFGPPLESAFDHEDFT
GSSSLGFTSSPSPFSSSSPENVEDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPSCRAP
PPEARGIRAPPLPDSPQPLASSPGPWGLEALAGGDLMPAPADPTAREGLAAPPRRLRS
RKVSCPLTRSNGDLSRSLSPSPLGSSAASTALERPSFLSQTGHGVSRGPSPVVLGSQD
ALPIATAFTEYVHAYFRGHSPSCLARVTGELTMTFPAGIVRVFSGTPPPPVLSFRLVH
TTAIEHFQPNADLLFSDPSQSDPETKDFWLNMAALTEALQRQAEQNPTASYYNVVLLR
YQFSRPGPQSVPLQLSAHWQCGATLTQVSVEYGYRPGATAVPTPLTNVQILLPVGEPV
TNVRLQPAATWNLEEKRLTWRLPDVSEAGGSGRLSASWEPLSGPSTPSPVAAQFTSEG
TTLSGVDLELVGSGYRMSLVKRRFATGMYLVSC"
BASE COUNT 667 a 1052 c 916 g 551 t
ORIGIN
1 tggcgcctgc cccgtcagac aggggcccca tcccactcgc taccctgtcc gatggggaaa
61 ctgaggcacg gagctggaca gtgactcaga caccaggagc tgcctggagt ggagctgaga
121 gctcaggtct gggctcagcc agtccagagt acaaatctac tgtcccttcc tagctgtgtg
181 atcttgacag gcactggacg gggcctgcag gggtctccac agagaccatc aggatgtcgt
241 attttgggga gcatttttgg ggcgagaaaa atcatggctt tgaggtcctg taccacagcg
301 tgaagcaggg gcccatctcc accaaggagc tggcggactt catccgggag agggccacca
361 tcgaggagac ctactcgaag gcgatggcga aactctccaa gctggccagc aacgggaccc
421 ccatggggac cttcgccccg ctctgggagg tcttccgcgt ctcctcggac aagctggcgc
481 tgtgccacct ggaactgaca cggaagttac aggatctcat caaggacgtt ctccgctacg
541 gcgaggaaca gctcaagacc cacaagaagt gcaaggagga agtggtgagc accttggatg
601 ctgtgcaggt actctcgggc gtcagccagc tcctgcccaa gtcccgcgag aactacctga
661 accgttgcat ggaccaggag cggctgcgga gggagagtac cagccagaag gagatggaca
721 aggcggagac taaaaccaag aaggcggcag agagcctgcg gcgctcagtg gaaaaataca
781 actcagcccg agctgacttt gagcagaaga tgctggactc agccctgcgc ttccaagcca
841 tggaggagac acacctgagg cacatgaagg cactgctggg ctcatatgct cactcggtgg
901 aggacacgca cgtgcagatt gggcaggtgc atgaggaatt taagcagaac atcgagaacg
961 tcagcgtgga gatgctactc aggaagtttg cagagagtaa gggcacaggc cgggagaagc
1021 ctggacctct ggacttcgag gcatacagtg cggctgccct gcaggaagcg atgaaacgtt
1081 tgcggggagc caaggccttt cgccttccag gactaagccg gcgggagcgg gagccggagc
1141 cacctgcagc tgtagatttc ctggagcccg attcagggac atgtccagag gtggatgaag
1201 aaggtttcac tgtccggcct gatgtgaccc agaacagcac ggccgagccc tcccgtttct
1261 cgtccagcga ctccgacttc gacgatgaag agccccgcaa gttctatgtg cacatcaagc
1321 ctgccccggc ccgggctcca gcctgcagcc ccgaggcagc agcggcacag ctcagggcca
1381 ccgcaggcag cctcatcctt cctcctggcc cagggggcac catgaaacgc cattcttcac
1441 gggacgctgc tgggaaaccc cagagacctc ggtctgcccc cagaaccagc agctgtgcag
1501 agagattgca gtcagaggag caggtgtcca agaacctctt tgggccgccc ctggagtcag
1561 cctttgacca cgaagatttt acaggctcta gcagcctggg cttcacctcc agcccctccc
1621 ctttctcctc ctcgtcgccc gaaaacgtgg aggattccgg cctggactct ccgtcccacg
1681 cggcacctgg cccctcccca gattcctggg tcccccgccc aggcaccccg cagagcccgc
1741 ccagctgtag ggcgccaccc ccagaggcca ggggtatccg ggcaccgcct ctgccagact
1801 cgccgcagcc cctcgcctcg tctccaggcc cctgggggct ggaggccttg gccggaggag
1861 acctgatgcc tgcacctgct gaccccacag ccagggaggg cctggcagcc ccacccagga
1921 gacttcgctc taggaaggtg tcctgccctc tcacacgtag caatggggac ctgtctcgtt
1981 ccctgagccc ctccccactg ggctcttcag ccgccagcac tgccttggaa cggcccagct
2041 tcttatccca gacaggacac ggagtctccc ggggtccgag ccctgtggtc ctgggctccc
2101 aggatgccct gcccatagcc acagccttca cggagtatgt ccacgcctac ttccgtggcc
2161 acagccccag ctgcctggct cgagtaactg gggagctgac catgaccttc cctgctggca
2221 tcgtgcgtgt gttcagcggg accccaccac cacctgtcct cagcttccgg cttgtacaca
2281 caaccgctat tgagcacttc cagcccaacg ccgatctgct gttcagtgac ccctcccaga
2341 gtgaccctga gaccaaagac ttctggctca acatggcagc tctgaccgaa gccctgcagc
2401 gccaggcaga gcagaacccc actgcctcct actacaacgt ggtgctgctg cgataccagt
2461 tctcccgccc gggtccccag tctgtgcctc tgcagctcag tgcccactgg cagtgtggag
2521 ccaccctcac ccaggtctca gtggagtacg gctaccggcc cggtgccacg gctgtgccca
2581 caccactcac gaacgtccag atcctgctgc ctgtggggga gcctgtgacc aacgtccgct
2641 tgcagccggc tgccacctgg aacctggagg agaagcggct cacttggagg cttccagatg
2701 tgtccgaggc aggcggttct ggccgcctct ctgccagctg ggagccgctc tcagggccca
2761 gcacacccag ccccgtggct gcacagttca ccagcgaggg gaccactctg tcgggcgtgg
2821 acttggaact ggtgggcagc ggttaccgca tgtcgctggt gaagaggagg tttgccacag
2881 ggatgtacct ggtgagctgc tgaacccgca aatgctgctg ccccagctct acactgcgcc
2941 ctggtgctgg ctgaccaccc cctgccctcc tgccggaccc tggggcctcc caccccagcc
3001 tccctgaggc ccatactcca cggagaggag ccccatgccc agcctggctg agcccgagat
3061 tcgctcctcc ccctcatgcc aaccccacac aggtcccggc cttttaatgt tctttgaata
3121 aacactttat tttctaataa aataaaaaag gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3181 aaaaaa
//