LOCUS BC041096 3964 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens chloride channel accessory 2, mRNA (cDNA clone MGC:46036 IMAGE:5752653), complete cds. ACCESSION BC041096 VERSION BC041096.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3964) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3964) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: n Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 51988882. FEATURES Location/Qualifiers source 1..3964 /db_xref="H-InvDB:HIT000052504" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46036 IMAGE:5752653" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3964 /gene="CLCA2" /gene_synonym="CACC" /gene_synonym="CaCC-3" /gene_synonym="CACC3" /gene_synonym="CLCRG2" /db_xref="GeneID:9635" /db_xref="HGNC:HGNC:2016" /db_xref="MIM:604003" CDS 64..2895 /gene="CLCA2" /gene_synonym="CACC" /gene_synonym="CaCC-3" /gene_synonym="CACC3" /gene_synonym="CLCRG2" /codon_start=1 /product="chloride channel accessory 2" /protein_id="AAH41096.1" /db_xref="GeneID:9635" /db_xref="HGNC:HGNC:2016" /db_xref="MIM:604003" /translation="MTQRSIAGPICNLKFVTLLVALSSELPFLGAGVQLQDNGYNGLL IAINPQVPENQNLISNIKEMITEASFYLFNATKRRVFFRNIKILIPATWKANNNSKIK QESYEKANVIVTDWYGAHGDDPYTLQYRGCGKEGKYIHFTPNFLLNDNLTAGYGSRGR VFVHEWAHLRWGVFDEYNNDKPFYINGQNQIKVTRCSSDITGIFVCEKGPCPQENCII SKLFKEGCTFIYNSTQNATASIMFMQSLSSVVEFCNASTHNQEAPNLQNQMCSLRSAW DVITDSADFHHSFPMNGTELPPPPTFSLVQAGDKVVCLVLDVSSKMAEADRLLQLQQA AEFYLMQIVEIHTFVGIASFDSKGEIRAQLHQINSNDDRKLLVSYLPTTVSAKTDISI CSGLKKGFEVVEKLNGKAYGSVMILVTSGDDKLLGNCLPTVLSSGSTIHSIALGSSAA PNLEELSRLTGGLKFFVPDISNSNSMIDAFSRISSGTGDIFQQHIQLESTGENVKPHH QLKNTVTVDNTVGNDTMFLVTWQASGPPEIILFDPDGRKYYTNNFITNLTFRTASLWI PGTAKPGHWTYTLNNTHHSLQALKVTVTSRASNSAVPPATVEAFVERDSLHFPHPVMI YANVKQGFYPILNATVTATVEPETGDPVTLRLLDDGAGADVIKNDGIYSRYFFSFAAN GRYSLKVHVNHSPSISTPAHSIPGSHAMYVPGYTANGNIQMNAPRKSVGRNEEERKWG FSRVSSGGSFSVLGVPAGPHPDVFPPCKIIDLEAVKVEEELTLSWTAPGEDFDQGQAT SYEIRMSKSLQNIQDDFNNAILVNTSKRNPQQAGIREIFTFSPQISTNGPEHQPNGET HESHRIYVAIRAMDRNSLQSAVSNIAQAPLFIPPNSDPVPARDYLILKGVLTAMGLIG IICLIIVVTHHTLSRKKRADKKENGTKLL" BASE COUNT 1272 a 782 c 783 g 1127 t ORIGIN 1 tgaaaacctg acacaatgta tgcagcaggc tcagtgtgag tgaactggag gcttctctac 61 aacatgaccc aaaggagcat tgcaggtcct atttgcaacc tgaagtttgt gactctcctg 121 gttgccttaa gttcagaact cccattcctg ggagctggag tacagcttca agacaatggg 181 tataatggat tgctcattgc aattaatcct caggtacctg agaatcagaa cctcatctca 241 aacattaagg aaatgataac tgaagcttca ttttacctat ttaatgctac caagagaaga 301 gtatttttca gaaatataaa gattttaata cctgccacat ggaaagctaa taataacagc 361 aaaataaaac aagaatcata tgaaaaggca aatgtcatag tgactgactg gtatggggca 421 catggagatg atccatacac cctacaatac agagggtgtg gaaaagaggg aaaatacatt 481 catttcacac ctaatttcct actgaatgat aacttaacag ctggctacgg atcacgaggc 541 cgagtgtttg tccatgaatg ggcccacctc cgttggggtg tgttcgatga gtataacaat 601 gacaaacctt tctacataaa tgggcaaaat caaattaaag tgacaaggtg ttcatctgac 661 atcacaggca tttttgtgtg tgaaaaaggt ccttgccccc aagaaaactg tattattagt 721 aagcttttta aagaaggatg cacctttatc tacaatagca cccaaaatgc aactgcatca 781 ataatgttca tgcaaagttt atcttctgtg gttgaatttt gtaatgcaag tacccacaac 841 caagaagcac caaacctaca gaaccagatg tgcagcctca gaagtgcatg ggatgtaatc 901 acagactctg ctgactttca ccacagcttt cccatgaatg ggactgagct tccacctcct 961 cccacattct cgcttgtaca ggctggtgac aaagtggtct gtttagtgct ggatgtgtcc 1021 agcaagatgg cagaggctga cagactcctt caactacaac aagccgcaga attttatttg 1081 atgcagattg ttgaaattca taccttcgtg ggcattgcca gtttcgacag caaaggagag 1141 atcagagccc agctacacca aattaacagc aatgatgatc gaaagttgct ggtttcatat 1201 ctgcccacca ctgtatcagc taaaacagac atcagcattt gttcagggct taagaaagga 1261 tttgaggtgg ttgaaaaact gaatggaaaa gcttatggct ctgtgatgat attagtgacc 1321 agcggagatg ataagcttct tggcaattgc ttacccactg tgctcagcag tggttcaaca 1381 attcactcca ttgccctggg ttcatctgca gccccaaatc tggaggaatt atcacgtctt 1441 acaggaggtt taaagttctt tgttccagat atatcaaact ccaatagcat gattgatgct 1501 ttcagtagaa tttcctctgg aactggagac attttccagc aacatattca gcttgaaagt 1561 acaggtgaaa atgtcaaacc tcaccatcaa ttgaaaaaca cagtgactgt ggataatact 1621 gtgggcaacg acactatgtt tctagttacg tggcaggcca gtggtcctcc tgagattata 1681 ttatttgatc ctgatggacg aaaatactac acaaataatt ttatcaccaa tctaactttt 1741 cggacagcta gtctttggat tccaggaaca gctaagcctg ggcactggac ttacaccctg 1801 aacaataccc atcattctct gcaagccctg aaagtgacag tgacctctcg cgcctccaac 1861 tcagctgtgc ccccagccac tgtggaagcc tttgtggaaa gagacagcct ccattttcct 1921 catcctgtga tgatttatgc caatgtgaaa cagggatttt atcccattct taatgccact 1981 gtcactgcca cagttgagcc agagactgga gatcctgtta cgctgagact ccttgatgat 2041 ggagcaggtg ctgatgttat aaaaaatgat ggaatttact cgaggtattt tttctccttt 2101 gctgcaaatg gtagatatag cttgaaagtg catgtcaatc actctcccag cataagcacc 2161 ccagcccact ctattccagg gagtcatgct atgtatgtac caggttacac agcaaacggt 2221 aatattcaga tgaatgctcc aaggaaatca gtaggcagaa atgaggagga gcgaaagtgg 2281 ggctttagcc gagtcagctc aggaggctcc ttttcagtgc tgggagttcc agctggcccc 2341 caccctgatg tgtttccacc atgcaaaatt attgacctgg aagctgtaaa agtagaagag 2401 gaattgaccc tatcttggac agcacctgga gaagactttg atcagggcca ggctacaagc 2461 tatgaaataa gaatgagtaa aagtctacag aatatccaag atgactttaa caatgctatt 2521 ttagtaaata catcaaagcg aaatcctcag caagctggca tcagggagat atttacgttc 2581 tcaccccaaa tttccacgaa tggacctgaa catcagccaa atggagaaac acatgaaagc 2641 cacagaattt atgttgcaat acgagcaatg gataggaact ccttacagtc tgctgtatct 2701 aacattgccc aggcgcctct gtttattccc cccaattctg atcctgtacc tgccagagat 2761 tatcttatat tgaaaggagt tttaacagca atgggtttga taggaatcat ttgccttatt 2821 atagttgtga cacatcatac tttaagcagg aaaaagagag cagacaagaa agagaatgga 2881 acaaaattat tataaataaa tatccaaagt gtcttccttc ttagatataa gacccatggc 2941 cttcgactac aaaaacatac taacaaagtc aaattaacat caaaactgta ttaaaatgca 3001 ttgagttttt gtacaataca gataagattt ttacatggta gatcaacaaa ttctttttgg 3061 gggtagatta gaaaaccctt acactttggc tatgaacaaa taataaaaat tattctttaa 3121 agtaatgtct ttaaaggcaa agggaagggt aaagtcggac cagtgtcaag gaaagtttgt 3181 tttattgagg tggaaaaata gccccaagca gagaaaagga gggtaggtct gcattataac 3241 tgtctgtgtg aagcaatcat ttagttactt tgattaattt ttcttttctc cttatctgtg 3301 cagaacaggt tgcttgttta caactgaaga tcatgctata ttttatatat gaagccccta 3361 atgcaaagct ctttacctct tgctattttg ttatatatat tacagatgaa atctcactgc 3421 taatgctcag agatcttttt tcactgtaag aggtaacctt taacaatatg ggtattacct 3481 ttgtctcttc ataccggttt tatgacaaag gtctattgaa tttatttgtt tgtaagtttc 3541 tactcccatc aaagcagctt tctaagttat tgccttggtt attatggatg atagttatag 3601 cccttataat gccttaacta aggaagaaaa gatgttattc tgagtttgtt ttaatacata 3661 tatgaacata tagttttatt caattaaacc aaagaagagg tcagcaggga gatactaacc 3721 tttggaaatg attagctggc tctgtttttt ggttaaataa gagtctttaa tcctttctcc 3781 atcaagagtt acttaccaag ggcaggggaa gggggatata gaggtcacaa ggaaataaaa 3841 atcatctttc atctttaatt ttactccttc ctcttatttt tttaaaagat tatcgaacaa 3901 taaaatcatt tgccttttta attaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3961 aaaa //