LOCUS BC041094 4060 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor, 65kDa, mRNA (cDNA clone MGC:46101
IMAGE:5551246), complete cds.
ACCESSION BC041094
VERSION BC041094.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4060)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4060)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21269865.
FEATURES Location/Qualifiers
source 1..4060
/db_xref="H-InvDB:HIT000052502"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46101 IMAGE:5551246"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4060
/gene="TAF5L"
/gene_synonym="PAF65B"
/db_xref="GeneID:27097"
CDS 90..1067
/gene="TAF5L"
/gene_synonym="PAF65B"
/codon_start=1
/product="TAF5L protein"
/protein_id="AAH41094.1"
/db_xref="GeneID:27097"
/translation="MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAA
NLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVY
LHLNLVQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLD
NKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRS
ENNGLEPPDMPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEI
SPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEV"
BASE COUNT 1238 a 825 c 863 g 1134 t
ORIGIN
1 ccctgcggca gagacgacgg aggcggaagc aacccgatcc cggaggcggc ggcggcgggg
61 ggagccggag ccgcctggga tgttcagtca tgaaacgagt gcgtaccgag cagattcaga
121 tggcagtgtc ctgctacctc aaacgccggc agtacgtgga ctcagatggt cccctgaagc
181 aaggactgcg gctgtcacag actgctgaag agatggcggc caatctaaca gtgcaatcag
241 aatctggttg tgccaacata gtgtctgcag ccccttgcca ggcagaaccc cagcaatatg
301 aagtacagtt tggacgactg cggaattttc tcactgattc tgattcccag catagccacg
361 aagtgatgcc tctcctctat cctctctttg tctacctcca tctcaacctg gtccaaaaca
421 gtccgaagag cacagtggaa agtttttaca gccgcttcca tggaatgttt ctgcagaatg
481 ctagccagaa ggatgtcatt gagcagctac agaccactca aaccatccag gacatcctat
541 ctaacttcaa gcttcgagca ttcctagata acaagtacgt ggtccgtctc caagaagaca
601 gctacaacta ccttatccgc tacctccaaa gtgacaacaa tactgccctg tgcaaagtcc
661 tcaccttaca tattcatctt gacgtgcagc ctgccaagag aacagactat cagctgtatg
721 ccagtggcag ctcctcccgc agtgagaaca acggtttgga gccccctgac atgcccagcc
781 ctattctgca gaacgaggct gccctagagg tcttacagga gagcattaag cgcgtcaagg
841 atgggcctcc ctccctcact accatctgct tctatgcctt ctataacaca gagcagctgt
901 tgaacactgc agaaatctcc cccgatagca agctgcttgc tgctgggttt gacaactcct
961 gtataaaact ttggagttta cgatccaaga agttaaaatc agagccccac caagtagacg
1021 tgtcccgcat ccatttggct tgtgatattc tggaggagga ggtatgaata ccattttttt
1081 cttccctgca cccgccttcc taatttcctt agaatgtcct taccaaacac gacatatctt
1141 agaatggact tcctagtttc cctcatcata tagctaaagc cagactaatg acatgttacc
1201 tgtagccatt gaattcctgc acatgcctaa cctaagatgc aaaaacaatt tttagcagca
1261 ttaacttctt attaatgaat ggtcagtatt tatactatgt gaaatgtgga tagcaacact
1321 aagcctaatg aaagaccttt agctaatatt gactttagct gagatttgca gtaaatatac
1381 acttatgtgt gtgcacattt gctcaggtac aaataatcgg tagtaggata actgagtcga
1441 agggcctcca ttgtcaactg taatgaatat tattttcccc acagaaggtt gtgccatttc
1501 acagtctcag caacagtagt aagaatactg gcatccctgc accctcacca cactggatgg
1561 atggtattgg ctttctgagg ccagtgcata tcctgtggct ccatgtaccc cggggtgttc
1621 ccagacccca cttggagaag taacacagga agtagagttg ccagctcccc tccccccgtc
1681 agtcagtgtt caatcttgtt tggcttgtaa ccgtttagga cagtcattga aaagggcatg
1741 cgcagcttgg gtttcaggtc accaaaaatc actactttag aaaaaatgtg ggccaaggaa
1801 gatagaaatt aaacttcaca gcattaactt ttctttagag tggtcctgaa aaagctgtgg
1861 gccaaagtat ttttgtctta tcaccactga aattcaggta gctctgcctc acattacttt
1921 ggatggaaaa ttctttacac aatgttgaat aattaaggag caaaaaaatc actctaatta
1981 aattacagtt aatgataagg atgtcaagaa tattgggtgc cctaaattaa accattgttt
2041 tcctgttcct gttttctgag tccacttcca gttaggatgg cctttgaatt tttgattctt
2101 gcaaccgaga cagtataatt gaaggatttc cttgtgatga gtgaagagtc tagattccca
2161 tgtagaagct ttaatttcta gaattttata gtactctcca aaatattttt tattacattt
2221 gtatttgaat tttcaaacat ctcttttcct tggagacagt tccctttttg ggagttcttc
2281 tgataaaact gaggaatact gcctgcattt gctttcgatt ttctgtaaat acaaaaaaaa
2341 attacactga ccttattagc tttgatgata cagagtttgg agattattct gtgcattaaa
2401 aattaatatt aaagaagata gcattatgac atctgataac agtagaccaa aataaaacat
2461 tttaagactc tggccactac tggtaactag ctctgtggct tgtcctatgt ttatttccgg
2521 gtatcagaag tgtatctgaa gactcagaag tgaggaaccg catgcggaat tccaggaact
2581 gaaagaaatt aagtatggct ggagttagga gaggggccaa gacaggaagt gatgtagtga
2641 cactgtctta tatgagcaat tatggcggcc aaactagggt agtggcagtg gcaaaggaga
2701 catggatgga ctagagaaga gctcggttat tcaattactg taggggataa gggagagcaa
2761 gcatcaaggg tgacgtttgt gtttcaggct taaacagttg gatgtccatc aagaagaaag
2821 caaaagacgt cattggaatg gtggttttgt ttaagcattt ctggcttaaa cagttggatg
2881 tccatcaaga agaaagcaaa agacgtcatt ggaatggtgg ttttgtttaa gcatttctgg
2941 ctttccatca tggttcatac tgaaagtact gtagatgcta gctaacctct gcccttttta
3001 agaataaacc ttttttttaa acttaagaac taaagctgag attctcctat tctgttgttg
3061 aggggcttcc tgcatgcccg cccattttat cacagcaatt tgagaagttt tctttttggt
3121 ttctgacaac aagcatttgg ggagaaagcc aggcataaat tagttacgat agttggtgtt
3181 taatgtttct ccagtgaaaa tttggacttt tctttttccc ttatagaatg cataattaaa
3241 acagactatt attttgaaat gaaatattga atattaaaaa aaataaaata gagactctta
3301 atacaggagc cacaaactca catacctaga gaaaccaaac aggtaaaagc aagtggtgaa
3361 gccacatgga ttaatgagat gatagaaagt acaaaatcac tatgtaagtc agattaaaaa
3421 gccagcttgc actctctgct ttcatctttt tgaagcaata actattacat aaatcagtga
3481 atacagtatt tctacagtat ttgaaacggt gttcacaccc agcaattcca cttctagaca
3541 tatatccaag agaatggaaa acatgtgcac acaggcactt gtacatgaat atttatggaa
3601 gcattattca caatagccaa aaagtggaaa cagtccaaat ggccatcaag atgaatgaat
3661 aaataaaatg tagtgtgtgc atgcagtgga atattatttg cccataaaaa gaaatgaagc
3721 actgatgcag gctgcaacat ggatgaactt gaaagcttta tgctacgtga aagaagccag
3781 tcataaaagg tcacctactg ttattccttt cataggaaat atccagatag gcaagtccat
3841 agagacagag aggagaggag tggttgccag gggctgggca aggagaatga gagtgaccgc
3901 taatgggtgt ggcatttctt tgtgaggtaa tgaaaatgtt ctgtattaga tagtggtgat
3961 cattgcacaa ctctgtgaat gtactaaaaa tcattgaatt gtacactttg aaagaattat
4021 atagtatgta attatatctc agtttaaaaa aaaaaaaaaa
//