LOCUS BC041032 2194 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens prolactin regulatory element binding, mRNA (cDNA clone
MGC:52403 IMAGE:4638313), complete cds.
ACCESSION BC041032
VERSION BC041032.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2194)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2194)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: e Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41349447.
FEATURES Location/Qualifiers
source 1..2194
/db_xref="H-InvDB:HIT000052484"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52403 IMAGE:4638313"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2194
/gene="PREB"
/gene_synonym="MGC3467"
/gene_synonym="SEC12"
/db_xref="GeneID:10113"
/db_xref="HGNC:HGNC:9356"
/db_xref="MIM:606395"
CDS 248..1501
/gene="PREB"
/gene_synonym="MGC3467"
/gene_synonym="SEC12"
/codon_start=1
/product="prolactin regulatory element binding"
/protein_id="AAH41032.1"
/db_xref="GeneID:10113"
/db_xref="HGNC:HGNC:9356"
/db_xref="MIM:606395"
/translation="MGRRRAPELYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNG
VHFLQLELINGRLSASLLHSHDTETRATMNLALAGDILAAGQDAHCQLLRFQAHQQQG
NKAEKAGSKEQGPRQRKGAAPAEKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVV
CFNHDNTLLATGGTDGYVRVWKVPSLEKVLEFKAHEGEIEDLALGPDGKLVTVGRDLK
ASVWQKDQLVTQLHWQENGPTFSSTPYRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQ
PPPCYLTAWDGSNFLPLRTKSCGHEVVSCLDVSESGTFLGLGTVTGSVAIYIAFSLQC
LYYVREAHGIVVTDVAFLPEKGRGPELLGSHETALFSVAVDSRCQLHLLPSRRSVPVW
LLLLLCVGLIIVTILLLQSAFPGFL"
BASE COUNT 480 a 608 c 646 g 460 t
ORIGIN
1 cggagggagc cgcgagacag gtgcgcatgc gcagtgcgcg tctgcgagac cgacttggac
61 ggagccgagc tgaggctcgg cttcctgctg atggtcaggg ttttggcaac tccccggtgt
121 gagaggggta gggagtgctc ccggcggcga cggggccgag ttcaccagcc gccggggcag
181 tagtcgaagg cccggcgcgg catgtcctgg gtgccgcggt gcgggcagtg aacgcgcgcc
241 gggcgggatg ggccggcgcc gggcgccaga gctgtaccgg gctccgttcc cgttgtacgc
301 gcttcaggtc gaccccagca ctgggctgct catcgctgcg ggcggaggag gcgccgccaa
361 gacaggcata aagaatggcg tgcactttct gcagctagag ctgattaatg ggcgcttgag
421 tgcctccttg ctgcactccc atgacacaga gacacgggcc accatgaact tggcactggc
481 tggtgacatc cttgctgcag ggcaggatgc ccactgtcag ctcctgcgct tccaggcaca
541 tcaacagcag ggcaacaagg cagagaaggc cggttccaag gagcaggggc ctcgacaaag
601 gaagggagca gccccagcag agaagaaatg tggagcggaa acccagcacg aggggctaga
661 actcagggta gagaatttgc aggcggtgca gacagacttt agctccgatc cactgcagaa
721 agttgtgtgc ttcaaccacg ataataccct gcttgccact ggaggaacag atggctacgt
781 ccgtgtctgg aaggtgccca gcctggagaa ggttctggag ttcaaagccc acgaagggga
841 gattgaagac ctggctttag ggcctgatgg caagttggta accgtgggcc gggaccttaa
901 ggcctctgtg tggcagaagg atcagctggt gacacagctg cactggcaag aaaatggacc
961 caccttttcc agcacacctt accgctacca ggcctgcagg tttgggcagg ttccagacca
1021 gcctgctggc ctgcgactct tcacagtgca aattccccac aagcgcctgc gccagccccc
1081 tccctgctac ctcacagcct gggatggctc caacttcttg ccccttcgga ccaagtcctg
1141 tggccatgaa gtcgtctcct gcctcgatgt cagtgaatcc ggcaccttcc taggcctggg
1201 cacagtcact ggctctgttg ccatctacat agctttctct ctccagtgcc tctactacgt
1261 gagggaggcc catggcattg tggtgacgga tgtggccttt ctacctgaga agggtcgtgg
1321 tccagagctc cttgggtccc atgaaactgc cctgttctct gtggctgtgg acagtcgttg
1381 ccagctgcat ctgttgccct cacggcggag tgttcctgtg tggctcctgc tcctgctgtg
1441 tgtcgggctt attattgtga ccatcctgct gctccagagt gcctttccag gtttccttta
1501 gcttccctgc ttcctgggaa tcaggagcct ggacactgcc atctctagag cagagtggag
1561 gcctggactc cctttgctca ctccattcgg gtccacagct gaggttgcct ctgacaagat
1621 gaatgggcac tgcctgccct tctagtgaaa aggcttggct atggccctgt gtgactccag
1681 gtcccaggaa ccttgccttc gtcatctgtg gatccatcca gaacagcggt atctgaagcc
1741 caggccatac tccctgcctc ctttcttctg cctaccagag gctccagagt tgagcttgtc
1801 cttatctaga aacatgtgaa gatgcccaag agcctggagg cactgctgtc cttcctgcag
1861 aaacagtttc tcctcctccc ctcagccttg tggccagttc ctcttcacat gaagcccctg
1921 gcatttgctg gggaagggac tggcctggta cttgctgtta gggcaggaag gggcaaaagg
1981 aagacttggg tagtaatctg ggggttcaga tgggtagcac taagccagct ggcctaaaga
2041 tgcaataagt tcctaggtag tctaccctta ccttgaggaa tgggaaaatg aacctcagcc
2101 cattaggcag gaaaagttga tatttaataa acaaggaaag agtgaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaacaaa aaaaaaaaaa aaaa
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