LOCUS BC041023 1672 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens SH3 domain containing ring finger 1, mRNA (cDNA clone IMAGE:3835275), partial cds. ACCESSION BC041023 VERSION BC041023.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1672) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1672) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: c Column: 3. FEATURES Location/Qualifiers source 1..1672 /db_xref="H-InvDB:HIT000096534" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3835275" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_9" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1672 /gene="SH3RF1" /gene_synonym="KIAA1494" /gene_synonym="POSH" /gene_synonym="RNF142" /db_xref="GeneID:57630" /db_xref="HGNC:HGNC:17650" CDS <1..911 /gene="SH3RF1" /gene_synonym="KIAA1494" /gene_synonym="POSH" /gene_synonym="RNF142" /codon_start=3 /product="SH3RF1 protein" /protein_id="AAH41023.1" /db_xref="GeneID:57630" /db_xref="HGNC:HGNC:17650" /translation="KALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIHGFF PTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGM LADKIGIFPISYVEFNSAAKQLIEWDKPPVPGVDAGECSSAAAQSSTAPKHSDTKKNT KKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQV HISTTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGAPPPLLLLLEWDRGPWQDPLTR LHIYGRRLAPVCMLLYIHTLLGKRIN" BASE COUNT 433 a 487 c 408 g 344 t ORIGIN 1 ccaaagcatt atacaactat gaaggaaaag agcctggaga ccttaaattc agcaaaggtg 61 acatcatcat tttgcgaaga caagtggatg aaaattggta ccatggggaa gtcaatggaa 121 tccatggctt tttccccacc aactttgtgc agattattaa accgttacct cagcccccac 181 ctcagtgcaa agcactttat gactttgaag tgaaagacaa ggaagcagac aaagattgcc 241 ttccatttgc aaaggatgat gttctgactg tgatccgaag agtggatgaa aactgggctg 301 aaggaatgct ggcagacaaa ataggaatat ttccaatttc atatgttgag tttaactcgg 361 ctgctaagca gctgatagaa tgggataagc ctcctgtgcc aggagttgat gctggagaat 421 gttcctcggc agcagcccag agcagcactg ccccaaagca ctccgacacc aagaagaaca 481 ccaaaaagcg gcactccttc acttccctca ctatggccaa caagtcctcc caggcatccc 541 agaaccgcca ctccatggag atcagccccc ctgtcctcat cagctccagc aaccccactg 601 ctgctgcacg gatcagcgag ctgtctgggc tctcctgcag tgccccttct caggttcata 661 taagtaccac cgggttaatt gtgaccccgc ccccaagcag cccagtgaca actggcccct 721 cgtttacttt cccatcagat gttccctacc aagctgccct tggagcgcca ccgccgctgc 781 tgctgctgct ggaatgggac cgaggcccat ggcaggatcc actgaccaga ttgcacattt 841 acggccgcag actcgcccca gtgtgtatgt tgctatatat ccatacactc ctcggaaaga 901 ggattaacta gagctgagaa aaggggagat gtttttagtg tttgagcgct gccaggatgg 961 ctggttcaaa gggacatcca tgcataccag caagataggg gttttccctg gcaattatgt 1021 ggcaccagtc acaagggcgg tgacaaatgc ttcccaagct aaagtcccta tgtctacagc 1081 tggccagaca agtcggggag tgaccatggt cagtccttcc acggcaggag ggcctgccca 1141 gaagctccag ggaaatggcg tggctgggag tcccagtgtt gtccccgcag ctgtggtatc 1201 agcagctcac atccagacaa gtcctcaggc taaggtcttg ttgcacatga cggggcaaat 1261 gacagtcaac caggcccgca atgctgtgag gacagttgca gcgcacaacc aggaacgccc 1321 cacggcagca gtgacaccca tccaggtaca gaatgccgcc ggcctcagcc ctgcatctgt 1381 gggcctgtcc catcactcgc tggcctcccc acaacctgcg cctctgatgc caggctcagc 1441 cacgcacact gctgccatca gtatcagtcg agccagtgcc cctctggcct gtgcagcagc 1501 tgctccactg acttccccaa gcatcaccag tgcttctctg gaggctgagc ccagtggccg 1561 gatagtgacc gttctccctg gactccccac atctcctgac agtgcttcat cagcttgtgg 1621 gaacagttca gcaaccaaac cagacaagga tagcaaaaaa aaaaaaaaaa aa //