LOCUS BC041009 3567 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens chromosome 9 open reading frame 25, mRNA (cDNA clone
MGC:44061 IMAGE:5284905), complete cds.
ACCESSION BC041009
VERSION BC041009.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3567)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3567)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC041009.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: n Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22218620.
FEATURES Location/Qualifiers
source 1..3567
/db_xref="H-InvDB:HIT000052479"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44061 IMAGE:5284905"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3567
/gene="C9orf25"
/gene_synonym="bA573M23.5"
/gene_synonym="FLJ39031"
/db_xref="GeneID:203259"
CDS 308..778
/gene="C9orf25"
/gene_synonym="bA573M23.5"
/gene_synonym="FLJ39031"
/codon_start=1
/product="C9orf25 protein"
/protein_id="AAH41009.1"
/db_xref="GeneID:203259"
/translation="MMEEIDRFQDPAAASISDGDCDAREEKQRELARKGSLKNGSMGS
PVNQQPKKNNVMARTRLVVPNKGYSSLDQSPDEKPLVALDTDSDDDFDMSRYSSSGYS
SAEINQDLNIQLLKDGYRLDEIPDDEDLDLIPPKSVNPTCMCCQATSSTACHIQ"
BASE COUNT 743 a 1064 c 1007 g 753 t
ORIGIN
1 gagtcaccgc agtggctgag ctgctgacag gaggcggcag cggagtagga ggcgaggcaa
61 gacctgcggc tcggcccggc cacagccacg gtagtgctag gcaagcccac ggagtcacgc
121 cggcctcagc cagtctgcga acctctcgcc cccgcccacc cctgcatccg cccggcccct
181 gcccgcccga gtggtccggg gaggcctagt ctgcaccacc cgccgggctc ctggggccgc
241 cgccccgcgc ggtcctgtcg gcgtccgcgg ccgcgcccgg cccctggccc gctcgcccgc
301 cggcaccatg atggaggaga tcgaccggtt ccaggaccca gccgccgcct ccatctctga
361 cggagactgt gacgcccggg aggagaagca gcgggagctg gcccggaagg gctccctgaa
421 gaatggcagc atgggtagcc ctgtcaacca gcaacccaag aagaacaatg tcatggcccg
481 aacaaggctg gtcgtcccca ataaaggcta ctcctcactt gaccagagcc ctgatgagaa
541 gccactggta gcccttgaca cggacagcga tgatgacttt gacatgtcta gatactcctc
601 ctccggctac tcctctgctg agatcaacca agatttgaac atccagctgc tgaaggacgg
661 ctaccggtta gatgagatcc ccgacgacga ggacctagac ctcatccccc ccaagtccgt
721 gaaccccacg tgcatgtgct gccaggccac gtcctccacc gcctgccaca ttcagtagcg
781 ggcggggcca ctgcggtcgc cggggcgggg ccgccaaggg ccgggtagga cgggcagagg
841 ccgacccctt cccagctcgt ctgcctgccc ccggccccgc gcccctacag ccgccaacct
901 cgtataacag tcattgcttc ctcctatggt aggacgtgta cctctgtgtg ttcatggagc
961 tggagaaacc aaaactgggt ctctctccac ccgggagctg aggaggggtg ggggccgttt
1021 gttcagttac ctgggggaac ctcacccagc accctgcccc gcttcccagg gctggccaag
1081 agagaagact ggacggcagg gaggtcaaca ttaacgagtg gggggatcac aaagccaggg
1141 gcttggcccc accccagcga agccatgaac tcccaagccc cggcctcagc ctaaccagga
1201 aaggggctcg gagggagaaa ggcccagggc agtggggacg ggtcccagca cctcggagcc
1261 cccttcacac gccccctacc ggcccatgtt tctatttgca tttccccctc ctcagatggg
1321 aagcctggca aagctgccca accgggtagt gcccctcacc catcggatca ctgccttctt
1381 cctcctcttg ccccattcac ccgcttcctt gcactctggg agtggggcag ggtaaggtgg
1441 gccttacaga caggctgagg tttgggtggt gtgatctgtc ctaattggcc cctcaccaat
1501 gcatctatct gtctgccacg agcccacccc accctgcccc caccctcacc cacgcttctg
1561 ctcattggtc tcaatcccag cctggaagca gggagtaagg ctggactcca atggcccatt
1621 cccctcaccc cagcccaaga cgtgggaggc tgcttcccag taagaatcca ggagcaagct
1681 ttggtgaatc cagtgggctg agtggctcta tggatgtggt tgtttggatg tggtagggag
1741 tgcttagcag aatgtgtgtg tatctctgag gctgtcaggg ggtgggtggg tgtgtgtctc
1801 tgttggacct gtctctcctc agtctattcc tgtcatagat gtgggtgtcc ctggtaggga
1861 agtgcctgtg tggtctgttt acagtgcaga aggcggctca gcagtgcaat gggctgacag
1921 ccttggaccg ggagtcagaa gcctgggttc tggttgtagc tctggcccct ccctgtgatc
1981 ttcagcaagc cacttgcttt ctctcgtctt cagtttcctc aactagaaaa tgaacagcag
2041 ctgaaattat gttgaagatc cttttatacc tgaaagagtt tcttcataga aatttctgtg
2101 gtggggaggg ggcaatctct gtgtgtctca gtatacctaa aggttggggt ggggcggagt
2161 tgtgtgtctc tgtagaaagg cgaaggggca gttcctatca ggactgtgta tgtctgagca
2221 catgtggctc tgtttgggat tacgtgtttg tctgtgaatg tgtgtgtgtg ttggagggtt
2281 gtctattgtg tgtggctgta tagggtgtct gtagatcaag atgtgtatac agctgcttct
2341 gctattgctg gtttggggga ggggactgga aagctgagac tgaaaatcaa gagggaagag
2401 gtgaggaagg cccacccctg gggctgggca gtgtagacct gccaccgtgt gaagaaaaat
2461 gaaagcacag atagcctaag actgcacagg cctgtgccca cataccttat agcacaggcc
2521 caggtggatc atctcatgct aacaccccac atgtgctggt ggatccactc ccatggatcc
2581 actcacatgc tgcaggcatg cagtagactc acccacagcc cactctctgg acaccaatcc
2641 tgggaggtgg gagctggaat ggggagcaat gagaggaggg agtgagactg ttggcttagg
2701 aagggtggta cctctccctg catcataccc aggaactgcc agctccaaaa tattggggta
2761 cagctcacca ccccccactc cgccaaccca ttcctacctc ctctagtgca gggacccaag
2821 ttagatgatg agaaaatgcc aaacaaaggg aggcaaggac agagaaggta cctgcaggac
2881 ccacaaggcc catactggcc cccatctgaa cccatctctc ccacccagat caacatcccc
2941 ccaacccctg tgcccccatc atctggaccc cagagccagc cctcccacta ccaccaccac
3001 caccccgggg ctccttggct cacctttcta gaacatgggt acctcctctt tttgggggct
3061 catttagact gctgcctttg ctgctgactt gcagtgtgac tcgggcccat tgttcaatct
3121 ctgtggccct gagacaccag ggaaaatctc cccccccaca ggacatacta gttccctggc
3181 aggcaagggc ttccaactga ggcagtgcat gtgtggcaga gagaggcagg aagctggcag
3241 tggcagcttc tgtgtctagg gaggggtgtg gctccctcct tccctgtctg ggaggttgga
3301 gggaagaatc taggccttag cttgccctcc tgccaccctt ccccttgtag atactgcctt
3361 aacactccct cctctctcag ctgtggctgc cacccagcca ggtttctccg tgctcactaa
3421 tttatttcca ggaaggtgtg tggaagacat gagccgtgta taatattttt tttaacattt
3481 tcattgcagt attgaccata atccttggtt gtgtatcgtg taacacaaat aatgatatta
3541 aaagcatcaa acaaaaaaaa aaaaaaa
//