LOCUS BC040993 2637 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens SLAIN motif family, member 2, mRNA (cDNA clone
MGC:43785 IMAGE:5272534), complete cds.
ACCESSION BC040993
VERSION BC040993.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2637)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2637)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: b Column: 18.
FEATURES Location/Qualifiers
source 1..2637
/db_xref="H-InvDB:HIT000052478"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43785 IMAGE:5272534"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2637
/gene="SLAIN2"
/db_xref="GeneID:57606"
/db_xref="HGNC:HGNC:29282"
/db_xref="MIM:610492"
CDS 424..2169
/gene="SLAIN2"
/codon_start=1
/product="SLAIN2 protein"
/protein_id="AAH40993.1"
/db_xref="GeneID:57606"
/db_xref="HGNC:HGNC:29282"
/db_xref="MIM:610492"
/translation="MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSL
GPGSPVRAGASIPSSGAASPRGFPLGLSAKSGGGPGSGPRRTSSEELRDATSLLAAGE
GGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPS
PDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSST
PVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVT
DVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHA
VYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSL
QGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQ
ASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQS
TVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPK
TYGSMKDDSWKDGCY"
BASE COUNT 699 a 719 c 658 g 561 t
ORIGIN
1 agcggaatca ccgcccctca agcaccggcc ccgccccata ggccccgtcc gtggccccgc
61 cccgccgcga gctggcgccg ggtcctctca gcgcccgccg gcggccgcgt ccacccccga
121 cgctctgagg tcaccgactg ggccggcccg cggggggcgg agggacggag ggaagatggc
181 ggcaggggcc ggatattggc gccgcctccc ccaatcccgg agccggcgca gatgaggcag
241 ttcggctggg gccagcggcg ctttggaacc cgaggtggag ggaccctggc ggtggggcct
301 ggtcctgcta tatgccggcg cctcggctag agtgagcggc ggcgacgcct ctttcctcca
361 tctctttccc tgtcgctgcg agagcgagcg ggcggcggag gcggcggcgg cggcggggcc
421 gggatggagg acgttaactc caacgtgaac gcggaccagg aggtgcggaa gctgcaggag
481 ctggtgaaga agctggagaa gcagaacgaa cagctgagga gccgctcggg ggccgtgcag
541 ggcgccggct cccttgggcc cggcagcccg gttcgggccg gcgcgtccat tccctcctcc
601 ggcgcggcgt ctcctcgggg cttccccttg ggcctcagcg ccaagtcggg cggcgggccc
661 gggtcgggcc cgaggcggac gagtagcgaa gagctgcggg acgccacctc cttgctagcg
721 gcgggcgagg gcggcttgct ggacgaggtg gagccgctgc ggcccgacga gctggagcgc
781 ctgtcaggct gggaggagga ggaggagagc tggctgtatt catcaccaaa gaaaaaactt
841 acaccaatgc agaaatcggt tagtccatta gtttggtgca ggcaagtttt ggattaccca
901 agtcctgatg ttgagtgtgc taaaaaatct cttatccaca aacttgatca aactatgtca
961 gctctcaaga ggcagaattt atataataat cctttcaact ctatgagtta caccagtcct
1021 tacagtccaa atgccagtag cccatacagc agtggcttca attctccatc ctcaacccca
1081 gtgcgacctc ctatagtcaa acagcttata cttcctggaa attcaggtaa cttgaaaagc
1141 tcagacagaa atcctccact cagtcctcag tcctctatag atagtgagtt aagtgcttca
1201 gaattagatg aagattcaat tggatccaat tataagctaa atgatgtaac tgatgtacag
1261 attctagccc ggatgcagga agaaagtctc cggcaagaat atgcagccac cacgtctcgg
1321 cgcagttctg gttcatcttg caattctaca agacggggta cttttagtga tcaggaactt
1381 gatgcacaaa gtttagatga tgaagatgac aatatgcatc atgcagtata ccctgctgtt
1441 aacaggtttt caccatcacc acgcaattca cctcgaccgt cacctaagca gtcacccaga
1501 aattcacctc gttcacgatc tcctgctcgg ggaatagaat atagtagagt gtccccacag
1561 cctatgatta gccgcttaca gcaacctcgc ctttcacttc aaggccatcc cacagattta
1621 cagacaagca atgttaaaaa tgaagaaaaa ctaagacgca gtcttccaaa cctgtcccga
1681 acatctaata cacaagttga ctcagtgaaa agcagcagaa gtgactcaaa ttttcaagtg
1741 ccaaacggag gaatacctcg tatgcaacct caggcttcag ccataccttc tccaggcaaa
1801 ttccgttccc ctgcagcacc atctcctttg gctcttcggc aaccagtgaa agcatttagt
1861 aaccatggct ctggttctcc tggtagccaa gaaataacac agctcacaca aaccacctcc
1921 tcacctgggc ctcctatggt tcagagcaca gtctcagcaa atcctcccag caatatcaac
1981 agcgctactc taaccagacc tgcagggaca actgcaatga gaagtggctt gcccagaccc
2041 agtgcccctt ctgctggggg cataccagtg cctcgcagca aacttgcaca gcctgttcgc
2101 agatccttgc cagctcctaa aacctatggt agcatgaaag atgacagttg gaaagatggc
2161 tgttactgac cagcaaagac aagaatgcag aagtccacgg cttcatggat acccttcacc
2221 aggctaaaaa acaactttta tatgcagact gttcagataa gactcttggg atttataaaa
2281 tcccagccct ctctgtctta attagcacaa accgacagag atcatcaaac agcactttaa
2341 tgacatttaa catcagatgt gtttggtaat catacaatca ctctccatag aatcactttt
2401 agttttgttt aatagaaact aggttgattt ttaaaaaata tttgacagag gccaatatct
2461 gggcaaatac ctaatggatg ccaaagagaa atgcccattt gtaaatgaga aaatgcccat
2521 ttgtgcacaa gaaaatggtg aattcaggct atccaaaact tcacattcaa cctaatttac
2581 tgtataaata gtatcaataa atatttgtgt taatgagaac caaaaaaaaa aaaaaaa
//