LOCUS BC040981 1696 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens sorting nexin 32, mRNA (cDNA clone MGC:42112
IMAGE:4797976), complete cds.
ACCESSION BC040981
VERSION BC040981.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1696)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1696)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC040981.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: h Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749488.
FEATURES Location/Qualifiers
source 1..1696
/db_xref="H-InvDB:HIT000052476"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42112 IMAGE:4797976"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1696
/gene="SNX32"
/db_xref="GeneID:254122"
/db_xref="HGNC:HGNC:26423"
CDS 104..1315
/gene="SNX32"
/codon_start=1
/product="sorting nexin 32"
/protein_id="AAH40981.1"
/db_xref="GeneID:254122"
/db_xref="HGNC:HGNC:26423"
/translation="METYAEVGKEGKPSCASVDLQGDSSLQVEISDAVSERDKVKFTV
QTKSCLPHFAQTEFSVVRQHEEFIWLHDAYVENEEYAGLIIPPAPPRPDFEASREKLQ
KLGEGDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFLQRLAAHPTLRRDNNFFVF
LEYGQDLSVRGKNRKELLGGFLRNIVKSADEALITGMSGLKEVDDFFEHERTFLLEYH
TRIRDACLRADRVMRAHKCLADDYIPISAALSSLGTQEVNQLRTSFLKLAELFERLRK
LEGRVVSDEDLKLSDMLRYYMRDSQAAKDLLYRRLRALADYENANKALDKARTRNREV
RPAESHQQLCCQRFERLSDYAKQELMDFKSRRVSSFRKNLIELAELELKHAKASTLIL
RNTLVALKGEP"
BASE COUNT 406 a 494 c 487 g 309 t
ORIGIN
1 gtcagctgag agcatcctca ctcggtcagt tcctcgggcg agttacgggg acgacctgcg
61 ggagcacgcg ggcagtggcc ggacgctgaa gcccaggaga gcgatggaga cgtatgcgga
121 ggttgggaag gagggcaagc cttcctgtgc atcggtggat ctgcagggag acagctcctt
181 acaggtggag atttctgacg cagtgagtga gcgggacaag gtgaaattca ctgttcaaac
241 aaagagctgc ctccctcact tcgcccagac cgagttctca gtcgtgcggc agcacgagga
301 gttcatctgg ctgcatgatg cctacgtgga gaatgaggag tacgccggcc tcatcatccc
361 cccagcccct ccgaggccag actttgaggc ttcgagggaa aagctacaga aattgggcga
421 gggggacagc tctgtcactc gggaagagtt tgccaagatg aagcaggagc tggaagcgga
481 gtacctggcc atctttaaga agacagttgc gatgcacgaa gtctttctgc agcgcctggc
541 ggcccacccc accctgcgtc gagacaacaa cttctttgtg tttttggaat atggacagga
601 tctgagtgtc cgggggaaga acaggaagga gctcctcgga gggtttctga ggaatattgt
661 gaagtccgcg gatgaagccc tcatcacggg catgtcaggg ctcaaggagg tggatgactt
721 ctttgagcat gagaggacct tcctgttgga gtatcacacc cgtatccgag atgcctgcct
781 gcgggccgac cgcgtcatgc gcgcccacaa gtgcctggca gacgattata tccctatctc
841 agctgcgctg agcagtctgg gaacacagga agtcaaccag ctaaggacga gcttcctcaa
901 attggcagag ctctttgaac ggctgaggaa gctggagggc cgggtggttt ccgatgagga
961 cctgaagctg tcagacatgc tgaggtacta catgcgtgac tcacaggcag ccaaggacct
1021 gctgtaccgg cggctgcggg cactggccga ctacgagaat gccaacaagg cgctggacaa
1081 ggcgcgcacc aggaaccggg aggtgcggcc cgccgagagc caccagcagc tgtgctgcca
1141 acgcttcgag cgcctctccg actacgccaa gcaagagctc atggacttca agtcccgccg
1201 ggtctcctct tttcgaaaga atctcattga gctggcagag ctggagctca aacacgccaa
1261 ggccagcacc ctgattctcc ggaacaccct tgttgcccta aagggggagc cttagagtag
1321 ccagagctca gccagaccct aatctgggat ctccagtgac cagggtatcc cagacccctc
1381 tctccggcaa gatgtctcct tccctagcag tgccactagc cacaccctca ctctgcccca
1441 catcctctca gggaaagccc aaacccccct atcaccacca caacaggtgc caggccctgc
1501 aagacacagg gcagcatggg catcataact ggccacagtc agcagagccc cagggaccct
1561 gacacccctc cccaggaagc tgaggaacag cctctaccct cacccatagc cctgaaggaa
1621 tcatagctca cttgatcccg gcctgttctc cttcgcaaat aaaaaccctg gttttgtagc
1681 aaaaaaaaaa aaaaaa
//