LOCUS BC040951 1386 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens splicing factor, arginine/serine-rich 2, interacting protein, mRNA (cDNA clone IMAGE:4429013), partial cds. ACCESSION BC040951 VERSION BC040951.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1386) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1386) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC040951.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: b Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759171. FEATURES Location/Qualifiers source 1..1386 /db_xref="H-InvDB:HIT000096478" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4429013" /tissue_type="Prostate, adenocarcinoma." /clone_lib="NIH_MGC_91" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>1386 /gene="SFRS2IP" /gene_synonym="CASP11" /gene_synonym="SIP1" /gene_synonym="SRRP129" /db_xref="GeneID:9169" /db_xref="MIM:603668" CDS 314..>1386 /gene="SFRS2IP" /gene_synonym="CASP11" /gene_synonym="SIP1" /gene_synonym="SRRP129" /codon_start=1 /product="SFRS2IP protein" /protein_id="AAH40951.1" /db_xref="GeneID:9169" /db_xref="MIM:603668" /translation="MTTPTRRSTRNTRAETASQSQRSPISDNSGCDAPGNSNPSLSVP SSAESEKQTRQAPKRKSVRRGRKPPLLKKKLRSSVAAPEKSSSNDSVDEETAESDTSP VLEKEHQPDVDSSNICTVQTHVENQSANCLKSCNEQIEESEKHTANYDTEERVGSSSS ESCAQDLPVLVGEEGEVKKLENTGIEANVLCLESEISENILEKGGDPLEKQDQISGLS QSEVKTDVCTVHLPNDFPTCLTSESKVYQPVSCPLSDLSENVESVVNEEKMTESSLVE ITEHKDFTLKTEELIESPKLESSEGEIIQTVGRQSVKSPEVQLLGHVETEDVEIIATC DTFGNEDFNNIQDSENNLLKKKK" BASE COUNT 501 a 241 c 290 g 354 t ORIGIN 1 tacagaattt atagaagcca gtgaaatcag tgcattgatt aggcagaaga gacatgaact 61 ggaattgtca tggtttcctg atacattacc tggaattgga agaattggtt ttataccctg 121 gaatgttgaa acagaagtcc ttcctctcat ttcttctgtg ttgccaagaa ctatttttcc 181 aacaagtacc atatctttcg aacattttgg tacttcttgc aagggatatg cattagcaca 241 tactcaagaa ggggaagaaa agaagcaaac ttctggtaca tcaaatacca gaggatcaag 301 acgaaaacct gcaatgacaa ctcctacaag gagatctaca cgtaacacaa gagctgaaac 361 agccagtcag tctcagagat ccccaatatc agacaattct gggtgtgatg ccccaggtaa 421 cagtaatcca tctttaagtg ttccctcttc agctgagtca gaaaagcaaa caagacaggc 481 tccaaaacgg aagtctgtaa gaagaggaag aaaaccacct ttactgaaaa agaaacttcg 541 gagctctgta gctgcccctg aaaaatcatc ttccaatgat tcagtagatg aagaaacagc 601 agaatctgac acatcacctg tgttagaaaa agagcaccaa ccagatgtag acagtagtaa 661 catttgtact gtgcagactc atgtagaaaa ccagtctgct aattgcttga aaagttgcaa 721 tgagcaaata gaagaaagtg agaagcatac tgcaaattat gatacagagg aaagagtagg 781 atcttcatct tctgagtctt gtgctcaaga tcttcctgtg ctagttggtg aggaagggga 841 agttaaaaaa ctcgagaata caggtataga ggctaatgtt ttgtgtttgg aaagtgagat 901 ttctgaaaat attcttgaaa aaggaggtga tccattggaa aagcaagacc agatatctgg 961 actttcacaa tcagaggtaa agacagatgt atgtacagtt catcttccaa atgattttcc 1021 tacatgttta acatctgaaa gcaaagtgta ccaacctgta tcttgtcccc taagtgactt 1081 atctgagaat gtagagtcag tggttaatga agaaaaaatg acagagagtt ccctagtaga 1141 aattactgaa cataaagatt ttacactaaa aacagaggag cttatagaga gccccaagtt 1201 agaatcttct gagggtgaaa ttatacagac agtgggcaga caatctgtta agagcccaga 1261 ggttcaattg cttgggcatg ttgaaactga agatgtagaa ataattgcaa catgtgatac 1321 ttttgggaat gaagatttca ataatattca agactctgaa aataacttac taaaaaaaaa 1381 aaaaaa //