LOCUS BC040859 1872 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 22 open reading frame 30, mRNA (cDNA clone
MGC:50372 IMAGE:5535580), complete cds.
ACCESSION BC040859
VERSION BC040859.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1872)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1872)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734856.
FEATURES Location/Qualifiers
source 1..1872
/db_xref="H-InvDB:HIT000052456"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50372 IMAGE:5535580"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1872
/gene="C22orf30"
/gene_synonym="FLJ23059"
/gene_synonym="MGC50372"
/gene_synonym="RP4-694E4.2"
/db_xref="GeneID:253143"
/db_xref="HGNC:HGNC:28738"
CDS 449..1357
/gene="C22orf30"
/gene_synonym="FLJ23059"
/gene_synonym="MGC50372"
/gene_synonym="RP4-694E4.2"
/codon_start=1
/product="chromosome 22 open reading frame 30"
/protein_id="AAH40859.1"
/db_xref="GeneID:253143"
/db_xref="HGNC:HGNC:28738"
/translation="MQRLFMTQFTQGLKGLRSPASIADKVFCSLPYSVGRVLSIWSQH
GPSVCSFEISSLHSPHCKRQPSLGTTSSHTMLPYVPLPGMEATYNTSGSQTRLEPPFP
ALVPKSCLVAESAVSKLLLSASEFQVRGLDELDGVKAACPCPQSSPPEQKEAEPEKRP
KKVSQIRIRKTIPRPDPNLTPMGLPRPKRLKKKEFSLEEIYTNKNYKSPPANRDLDSS
CPSTDSETGHFLVFGYAQRQAQPHPLLASRRLIGCSSPEGRGHPRSYPYWRRLLVLCW
YLPGWRAGRVTWLRLATWAGRGDSSL"
BASE COUNT 458 a 540 c 454 g 420 t
ORIGIN
1 gaccttcata gatttgagca acaagatgcc gtccctgctg tttggttctg aaatcttccc
61 agtatccttt catgtgaaat catccagctc agattgcacg actgagtcct caaggacttt
121 tcctgagcac tgtgctccgg caaggcttgc cttaggagag gccctccagt gcccgtctca
181 acctcccaag tggacctttt ctttcttctt gtcccacggt tgccctggga tggcaacatt
241 cagggaagac actggcgtcc atagtcagac ccacactcag gctcctcccc agcctccagc
301 tcctctccaa gactatggag gcactgccat agtccagacc agagcagact gctctgtcct
361 tggccttcac acacttctag cactttgttc cccaggatgt taccgaatct ggacaaaaaa
421 acggagcttc tccagccaca tgcctaccat gcagaggctc ttcatgaccc agtttacaca
481 gggcctgaaa gggttacggt ctccagcctc catagcagac aaggtcttct gttctctgcc
541 ctactcggtg ggcagagtcc tatccatttg gagccagcat ggtccttctg tctgctcctt
601 cgaaatctct tctcttcatt cccctcactg caagcggcaa ccaagtctgg gcaccacaag
661 cagccacacc atgttaccat atgtgcctct tccaggcatg gaagctacat ataacaccag
721 cggcagtcag acgaggctgg agcctccatt ccctgccttg gtaccaaagt cttgcttggt
781 agcagaatca gctgtcagca agctcctgct ttcagcctct gagttccagg ttcgtggatt
841 ggatgagctg gatggtgtga aagcagcatg cccctgccca cagagcagcc ccccagaaca
901 gaaagaggct gagccagaga agaggccaaa gaaagtctca cagattcgca tccggaaaac
961 cattcctagg ccagatccta atcttacccc catgggcctt cctcgaccca aaaggttaaa
1021 gaagaaggag tttagtttag aagagatata taccaacaag aattataaat ctcctcctgc
1081 aaacagggac ctggattcta gctgcccgag cactgacagc gaaaccgggc acttcctggt
1141 attcggatat gcgcagcgcc aagcgcagcc gcacccactg ctggcctcac gccgtctgat
1201 tggctgcagc tctccggagg ggcggggcca tccgagaagc tatccatatt ggaggaggct
1261 gctagtcctt tgctggtacc tgccgggctg gagagcgggg agggtcacgt ggttaagact
1321 cgccacgtgg gccgggcgcg gtgactcaag cctgtaatcc cagcactttg ggaggcagag
1381 gcgggcggat cacttgagac aggcctggcc aacctggtga ctctactaaa aatacaaaaa
1441 attagccggg agtggtggcg cgcgcctgta atcccagcta ctcgggaagc tgaggcagaa
1501 gaatcgcttg aactcgggag actgtaggtg ccgtgagccg aggtcgcgcc actgcactcc
1561 agcctgggag aaagactcgc ctaagcagtt tctctctttt cttttgcatt tttaatctta
1621 gacttttgga gatgttgaaa tggtcgctga aacactgcaa acacagggat gggggacaga
1681 tcccaaagta tagcagctac tcatgagtcc cagcgcccct cctgtccttc ccctactgct
1741 gcctaagtgg tcttcctaaa acacaagttt gcacttgtca gaaccactcc ttaagatctc
1801 tcatgggttg ccctcgtctc caaataaaga tactaaccac tgagctggca aaaaaaaaaa
1861 aaaaaaaaaa aa
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