LOCUS BC040849 2850 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HBS1-like (S. cerevisiae), mRNA (cDNA clone MGC:49906
IMAGE:5104748), complete cds.
ACCESSION BC040849
VERSION BC040849.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2850)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2850)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: b Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24431963.
FEATURES Location/Qualifiers
source 1..2850
/db_xref="H-InvDB:HIT000052454"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49906 IMAGE:5104748"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2850
/gene="HBS1L"
/gene_synonym="EF-1a"
/gene_synonym="ERFS"
/gene_synonym="HBS1"
/gene_synonym="HSPC276"
/db_xref="GeneID:10767"
/db_xref="HGNC:HGNC:4834"
CDS 112..2166
/gene="HBS1L"
/gene_synonym="EF-1a"
/gene_synonym="ERFS"
/gene_synonym="HBS1"
/gene_synonym="HSPC276"
/codon_start=1
/product="HBS1-like (S. cerevisiae)"
/protein_id="AAH40849.1"
/db_xref="GeneID:10767"
/db_xref="HGNC:HGNC:4834"
/translation="MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSR
RDKPSVEPVEEYDYEDLKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILI
EAVLKNKFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVP
KVAKMTVSGKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANP
PHTIQASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTL
MGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFE
TTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLL
VRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGE
NLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGK
IEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGC
IFCGPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKST
GEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEI
KE"
BASE COUNT 921 a 490 c 648 g 791 t
ORIGIN
1 gccaagatgg cgcatagggg ttctccaggc tgcagttggc gccttatcag tatctaagcg
61 gagtgttttg gaaggagtta aggggctgtg gcaaacgccc tctccgccgt catggcccgg
121 catcggaatg ttcgaggcta taactacgat gaagattttg aagatgatga tctctacggc
181 cagtctgtag aggatgatta ttgtatttcg ccgtcaacag ctgctcagtt tatttattca
241 cggcgtgaca aaccttccgt tgagcctgtg gaagaatatg attatgaaga tctgaaagaa
301 tcttccaatt ctgtttcaaa ccatcagctc agtggatttg atcaagctcg tctttattca
361 tgccttgatc acatgagaga ggtacttgga gatgctgtgc cagatgaaat attaattgaa
421 gcagttctga agaacaagtt tgatgtgcag aaggctttgt caggggttct ggaacaagat
481 agagtgcaga gtttgaagga caagaatgag gcaacagtat ctacaggaaa gatagcaaaa
541 ggaaaaccag tagattccca gacatcgcga agtgaatctg aaattgtgcc aaaagttgct
601 aaaatgactg tatctggaaa gaagcaaact atgggatttg aagtgcctgg agtatcttct
661 gaagaaaatg gtcatagttt ccacacacct caaaaaggac cgcccattga agatgccatt
721 gcttcttccg atgttcttga gactgcttct aaatctgcta atccacccca cacgattcaa
781 gcatcagaag agcagagttc aaccccagca ccggtgaaaa agtctggcaa gctgaggcag
841 caaatagatg tgaaggcgga actggagaag cggcaaggag ggaagcagct actcaactta
901 gtggtcattg gtcatgttga tgctgggaaa agtactctga tgggccatat gctttatctt
961 ctgggtaata taaacaaaag aactatgcat aagtatgaac aggagtctaa aaaggctggc
1021 aaagcttcgt ttgcatatgc atgggtcttg gatgaaactg gcgaagaaag ggaaagggga
1081 gtaaccatgg atgttggtat gacaaagttt gaaaccacaa ccaaagttat tacattaatg
1141 gatgctccag gccataagga cttcattcca aatatgatta caggagcagc ccaggcggat
1201 gtagctgttt tagttgtaga tgccagcagg ggagagtttg aagctggatt tgagactgga
1261 ggacaaacac gagagcatgg actcttggtc cgttctctgg gagtgacgca gcttgcagtt
1321 gcagttaata aaatggatca ggttaattgg caacaagaaa ggtttcaaga gattactgga
1381 aaacttgggc actttcttaa gcaagcaggt tttaaggaga gtgatgtagg ttttattcct
1441 acaagtggtc tcagtggtga aaatctaatc acaagatctc agtcaagtga actcacaaaa
1501 tggtataaag gactatgttt attagaacaa attgattcct ttaagcctcc ccagcgatct
1561 attgacaaac cttttagatt atgtgtgtcc gatgttttca aagatcaagg atctggattt
1621 tgcataactg gtaaaataga agctggttat atccaaactg gtgaccgact actggcaatg
1681 cctcctaatg aaacttgtac cgtgaaagga atcactctgc atgatgaacc tgtcgactgg
1741 gcggcagcag gcgatcatgt tagtcttact ttggttggga tggatatcat caaaatcaat
1801 gttggctgca tattttgtgg ccccaaagta cccattaaag cttgcactcg tttcagagcc
1861 cgaatcctca tctttaatat tgaaattcct atcactaaag gatttcctgt gctgttacac
1921 taccaaactg tcagtgaacc cgccgttatt aaacgattga ttagtgtctt aaacaaaagc
1981 acgggtgaag tcacaaagaa aaagcctaag tttttgacta aaggccagaa tgcattggta
2041 gagctacaga cacaaagacc aatagctctt gagctatata aagactttaa agagctgggg
2101 aggttcatgc tacgttacgg tggttctaca atagctgctg gtgttgtcac tgagataaaa
2161 gaatgatggg tcagaatttc taccacgttt ctggatacag tgaaatagct aacctctgtt
2221 tcaagaatgc agttattaag tcaaaggaac aatgtgcaat tgatatgttt ttagatgaga
2281 gagaaaaatt aaagctaaaa ttagctgcaa agaagtatta ataatcacct ctgcaaaaat
2341 tctaagttgc caactggcaa agaaagtcta atgttaaaaa caactttgcc tttgaaacgt
2401 taataaatgg atttactttg ctaagattta tggcaagtgt caaaaatagt atctgaagat
2461 actgaatcat catgaaatga actctacttc tggccaaagc acaatgtatt tgcagttttc
2521 tcttttgatt caattatact gcacatgttt taaggaaaag taacttaatt gggtttttca
2581 ggcagttgat atttgaccta agcttttttt tttttttttt ttccagttaa tgctaagaaa
2641 agatttgggg aaggttataa taaaagtatt ttgtggtgac cataagaatg tccctcccca
2701 aacaagtaaa cttgtgaaag tttaatttgg aattagtgga agctgttcct ttgaaagcca
2761 agatattatt taagttgtaa agccagctaa taaaatgcct tagtttgagc ataataaaaa
2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//