LOCUS BC040732 1336 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens leucine-rich repeats and transmembrane domains 1, mRNA
(cDNA clone MGC:50257 IMAGE:5223743), complete cds.
ACCESSION BC040732
VERSION BC040732.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1336)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1336)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 87 Row: m Column: 6.
FEATURES Location/Qualifiers
source 1..1336
/db_xref="H-InvDB:HIT000052450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50257 IMAGE:5223743"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1336
/gene="LRTM1"
/gene_synonym="HT017"
/db_xref="GeneID:57408"
/db_xref="HGNC:HGNC:25023"
/db_xref="IMGT/GENE-DB:25023"
/db_xref="MIM:25023"
CDS 383..1192
/gene="LRTM1"
/gene_synonym="HT017"
/codon_start=1
/product="LRTM1 protein"
/protein_id="AAH40732.1"
/db_xref="GeneID:57408"
/db_xref="HGNC:HGNC:25023"
/db_xref="IMGT/GENE-DB:25023"
/db_xref="MIM:25023"
/translation="MTLNLSNNSLSNLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHS
LPQLRELDLSSNNISHLPTSLGETWENLTILAVQQNQLQQLDRALLESMPSVRLLLLK
DNLWKCNCHLLGLKLWLEKFVYKGGLTDGIICESPDTWKGKDLLRIPHELYQPCPLPA
PDPVSSQAQWPGSAHGVVLRPPENHNAGERELLECELKPKPRPANLRHAIATVIITGV
VCGIVCLMMLAAAIYGCTYAAITAQYHGGPLAQTNDPGKVEEKERFDSSPA"
BASE COUNT 337 a 364 c 302 g 333 t
ORIGIN
1 aagcctctga aatgcaccat gtcggtgccc aggctcattc tgctctgcct taagtgtcct
61 tcgttctctg gaccacagcc ttcccaagaa tgaggacctg ttcttgctcc ctgctggacc
121 cctgcctcca gcaagatgct gagtacacag acgacccata ggtgaactgc tcctgttttc
181 cagtgtgatt gtcctgctcc aggtggtatg cagctgcccg gacaagtgtt actgtcagtc
241 atctacaaat tttgtagact gcagccagca gggtctggcc gaaatccctt cccatttacc
301 tcctcagact cgaacgctgc atttacaaga taatcagata caccatcttc ctgcttttgc
361 atttaggtca gtgccatggc tcatgacctt aaacttgtcc aacaattccc tttcaaatct
421 ggcccctgga gctttccatg ggcttcagca cttgcaggtt ttaaatctaa cccagaattc
481 actcctttcc ctggaaagca gacttttcca ttccctccct cagctgaggg agcttgattt
541 gtcatcaaac aacataagcc accttcccac atccttggga gagacttggg agaacctaac
601 tatacttgcg gttcaacaaa accagcttca gcagcttgat cgagcgctcc tggaatccat
661 gcccagtgtg aggcttttac ttctcaagga caacctctgg aaatgcaatt gccacttgct
721 cggtcttaaa ctctggctgg agaaatttgt ctataaaggg ggactaacag acggcatcat
781 ctgtgaatca ccagacacct ggaagggaaa ggacctcctt aggatccctc atgagctgta
841 ccagccctgc cctcttcctg ctcctgatcc agtgtcctcg caggctcagt ggcccggctc
901 tgcccacggt gtggtcctga ggcctcctga gaaccacaac gcgggggagc gagaactctt
961 ggagtgcgag ctcaaaccca agccaaggcc ggccaacctg cgtcatgcca ttgccactgt
1021 catcatcact ggcgttgtgt gtgggattgt gtgtctcatg atgttggcag ctgccatcta
1081 tggctgcacc tatgcggcaa tcacagccca gtaccatggg ggacccttgg ctcaaaccaa
1141 tgatcctggg aaggtggaag aaaaagagcg atttgacagc tcaccagcct gagagctttt
1201 gtctcaaata ggattggtca ttgcaggcca gaagatagtg tctgagtagg gctgatgtgt
1261 ttcctgttag tctgattttg cttttgccaa aagacaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaa
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