LOCUS BC040696 1042 bp mRNA linear HUM 12-OCT-2006
DEFINITION Homo sapiens candidate tumor suppressor in ovarian cancer 2, mRNA
(cDNA clone MGC:49937 IMAGE:6158258), complete cds.
ACCESSION BC040696
VERSION BC040696.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1042)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1042)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC040696.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18201879.
FEATURES Location/Qualifiers
source 1..1042
/db_xref="H-InvDB:HIT000052445"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49937 IMAGE:6158258"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1042
/gene="OVCA2"
/db_xref="GeneID:124641"
/db_xref="MIM:607896"
CDS 16..699
/gene="OVCA2"
/codon_start=1
/product="candidate tumor suppressor in ovarian cancer 2"
/protein_id="AAH40696.1"
/db_xref="GeneID:124641"
/db_xref="MIM:607896"
/translation="MAAQRPLRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSG
PHPVPDPPGPEGARSDFGSCPPEEQPRGWWFSEQEADVFCALEEPAVCRGLEESLGMV
AQALNRLGPFDGLLGFSQGAALAALVCALGQAGDPRFPLPRFILLVSGFCPRGIGFKE
SILQRPLSLPSLHVFGDTDKVIPSQESVQLASQFPGAITLTHSGGHFIPAAAPQRQAY
LKFLDQFAE"
BASE COUNT 220 a 305 c 305 g 212 t
ORIGIN
1 tccttgccgg gcataatggc cgcgcagcga cccctgcggg tcctgtgcct ggcgggcttc
61 cggcagagcg agcggggctt ccgtgagaag accggggcgc tgaggaaggc gctgcggggt
121 cgcgccgagc tcgtgtgcct cagcggcccg cacccggtcc ccgacccccc gggccccgag
181 ggcgccagat cagacttcgg gtcctgccct ccggaggagc agcctcgagg ctggtggttt
241 tcagagcagg aggccgacgt tttctgcgca ttggaagagc ccgccgtctg caggggcctg
301 gaggaatcac tggggatggt ggcacaggca ctgaacaggc tggggccttt tgacggcctt
361 cttggtttca gccaaggggc tgcgctagca gcccttgtgt gtgccctggg ccaggcaggc
421 gatccccgct tccccttgcc acggtttatc ctcttggtgt ctggtttctg tccccggggc
481 attgggttca aggaatccat cctgcaaagg cccttgtcat tgccttcgct ccatgttttt
541 ggggacactg acaaagtcat cccctctcag gagagtgtgc aactggccag ccaatttccc
601 ggagccatca ccctcaccca ctctggtggc cacttcattc cagcagctgc accccagcgt
661 caggcctacc tcaagttctt ggaccagttt gcagagtgaa agatcaagaa atgtctctgc
721 tcctacatcc agctcctcta ggggcagcct ccgtcatcca tgccctccca ggaccctcca
781 ctcactgctg tgattgcgcc tcagcagaac cagttaagag acaactatca attcttgaga
841 cccaaattat aagggccctg ccctgtactg aagaaaaggg gagcacaagg ccttaatgga
901 cattgacttg tgaaaacgca aacatgaata tggttggaga gccctggatt aggagggtga
961 catggggaag gcagaggctg gcaccatggt gactgccaca taataaagtg gtgatttgga
1021 aaaaaaaaaa aaaaaaaaaa aa
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