LOCUS BC040695 1406 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens Williams-Beuren syndrome chromosome region 16, mRNA
(cDNA clone MGC:49849 IMAGE:5785681), complete cds.
ACCESSION BC040695
VERSION BC040695.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1406)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1406)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538491.
FEATURES Location/Qualifiers
source 1..1406
/db_xref="H-InvDB:HIT000052444"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49849 IMAGE:5785681"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1406
/gene="WBSCR16"
/gene_synonym="DKFZp434D0421"
/gene_synonym="MGC44931"
/db_xref="GeneID:81554"
CDS 127..1203
/gene="WBSCR16"
/gene_synonym="DKFZp434D0421"
/gene_synonym="MGC44931"
/codon_start=1
/product="WBSCR16 protein"
/protein_id="AAH40695.1"
/db_xref="GeneID:81554"
/translation="MALVALVAGARLGRRLSGPGLGRGHWTAAGRSRSRREAAEAEAE
VPVVQYVGERAARADRVFVWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYR
LELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLE
PSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSE
SHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKL
GGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSG
VGKVRQAACGGTGCAVLNDTWPQS"
misc_feature 418..1158
/gene="WBSCR16"
/gene_synonym="DKFZp434D0421"
/gene_synonym="MGC44931"
/note="ATS1; Region: COG5184, ATS1, Alpha-tubulin
suppressor and related RCC1 domain-containing proteins
[Cell division and chromosome partitioning /
Cytoskeleton]"
/db_xref="CDD:COG5184"
BASE COUNT 297 a 369 c 458 g 282 t
ORIGIN
1 ggctgccgtc agcgcctttg ccttcaacca ggagtaaaag tggccgtagc ctcttccggc
61 gaggactggt gttaagggtc acgcaagatg gcggcgccca gaggctgctg aggcgcggaa
121 cggaggatgg cgctggtggc gttggtggct ggggctcggc tggggcggcg gctgagcggg
181 ccggggctgg ggcgagggca ctggacggcg gccgggcgct cccggagccg gcgcgaagcg
241 gcagaagccg aggcggaggt gcccgtggtc cagtacgtgg gcgagcgcgc tgcccgcgcc
301 gatcgcgtct tcgtgtgggg cttcagcttc tcgggggcgc tgggcgtgcc ttcctttgtg
361 gtgcccagct ccgggcccgg gccccgcgcc ggcgcccgac cgcgccgcag gatccagccc
421 gtgccctatc gcctggagct ggaccaaaag atttcatctg ctgcttgcgg ctatggattc
481 acactgctgt cctctaagac tgcggatgtt acgaaagtct gggggatggg actcaacaaa
541 gattctcagc ttggatttca caggagccgg aaagataaaa cgaggggcta cgagtatgtg
601 ttggagccct cacccgtctc cctgcctctg gacagacctc aggagacacg ggtgctgcag
661 gtctcctgcg gccgagctca ctctcttgtg ttgactgaca gggaaggagt cttcagcatg
721 ggaaacaatt cttatgggca atgtggaaga aaggtggtcg aaaatgaaat ttacagtgaa
781 agtcacagag tccacaggat gcaggacttc gatggccagg tggtccaggt cgcctgtggt
841 caggatcata gtctgttcct gacggataaa ggagaagtct attcttgtgg atggggtgct
901 gatgggcaaa caggtctggg tcactacaat atcaccagct cgcccaccaa gctgggtgga
961 gacctggcgg gagtgaacgt tatccaagtt gccacctacg gtgattgctg cctggccgtg
1021 tccgccgacg gaggactttt tggttgggga aactcggagt acctgcagct ggcctctgtc
1081 actgactcca cacaggtgaa tgtgccccgc tgcttacact tctcaggagt ggggaaggtg
1141 cgacaggctg catgcggtgg cacgggctgt gcagtgttaa acgatacatg gccacagagc
1201 tgagtcatcc tagagcaaac ctctggagtg gagagcgaac tacttcattc ccctccctta
1261 gcctgggcca gagagactcc agctctgcct tctccagcca aaaaatcaaa ggcagatggg
1321 agaacagcct tcagctttgg ataacgatga aatatctggc accactgatg aatattaaac
1381 tttctataac caaaaaaaaa aaaaaa
//