LOCUS BC040645 1426 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily c, member 2, mRNA (cDNA clone
IMAGE:4792972), with apparent retained intron.
ACCESSION BC040645
VERSION BC040645.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1426)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC040645.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: b Column: 13
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1426
/db_xref="H-InvDB:HIT000096297"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4792972"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 387 a 286 c 307 g 446 t
ORIGIN
1 tttctgcttc agaggtggct ctgtctactt ggaaaaagac ttgagttaaa gccttgagtc
61 tgtctttttc tgtctgcttc tcccattttt cagtcctgac aggtttgcat tactgttcta
121 gagactatgt tggcctgggg aaaaatagta tccacttcta ctgagctaga gattgcgtga
181 tctcagataa atgaaattcc tgctctttgg aactttatag taatgaatag atgtcattga
241 taaggatgta cagtggactt taaatttccc atgtatagat tatctgttca gaagattatt
301 tttggcaatt tttaattctt tgacttttct ccattattag cacaatccca gctgtttccc
361 tctgccactt agctggtgtg tgcttagaga atacaaacta actttaatac tattataagc
421 aaaatatggt taggaaggca gctctgtggc taaaccttga gtaattcaga ggggaccata
481 atttacccgc ttctcctttt accatccagg gaacagtcac tgaggataag aacaatgcct
541 cccatgttgt gtatcctgtc ccggggaatc tagaagaagg tgagacctgg gttttcctgt
601 ccacttgagt ggatggtttg gactaggagg cagaggacta agatcaccat tcagtacctg
661 ggctcctcct cttctttcaa tcttgaatcc tcttaccacc ttaagttcct attaccaagt
721 cccctgctac aacaggagag tgcattagtt agggcttttg tacagtattt tttttgtgtc
781 cccctttagc ttatatctct cccttctctt cctctatccc cagaggaatg ggtacgacca
841 gtcatgaaga gggataagca ggttcttctg cactggggct actatcctga caggtgagga
901 tgggttcctg gggcaggttt aagtataaga gccccagaag ccctaggaca tctagcagag
961 caagaggcca ctctttcaga gttattttta gatcacttaa tttgttttcc tctcacctag
1021 taagtgaacc tctgtcttgg gggaggtttg gacttagtgg acaagccttg ggctaaaagg
1081 attgaggctt tatgtgtgaa ttgattatcc cagcatcatt ttcgataagt aaatgttaga
1141 aacaatctaa atgtctaaca gtaggaaaat gtttcagtaa atttgtatat ctactcagtg
1201 gactattatg cagtctttaa agtgatataa catggataat ttataagtga atattattaa
1261 taattgcaaa aagtagcatg taggcctggc atggtggctc acgcctgtag tcccagcact
1321 ttgggaggcc aaggcaggcg gatcacctga ggttaggagt tcgagaccag cctggccaac
1381 atgctgaaac cccgtctcta ctaaaaatac aaaaaaaaaa aaaaaa
//