LOCUS BC040560 3284 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens heat shock 70kDa protein 4-like, mRNA (cDNA clone MGC:41835 IMAGE:5270824), complete cds. ACCESSION BC040560 VERSION BC040560.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3284) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3284) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 74 Row: l Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31541940. FEATURES Location/Qualifiers source 1..3284 /db_xref="H-InvDB:HIT000052430" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:41835 IMAGE:5270824" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3284 /gene="HSPA4L" /gene_synonym="APG-1" /gene_synonym="Osp94" /db_xref="GeneID:22824" /db_xref="HGNC:HGNC:17041" CDS 254..2773 /gene="HSPA4L" /gene_synonym="APG-1" /gene_synonym="Osp94" /codon_start=1 /product="heat shock 70kDa protein 4-like" /protein_id="AAH40560.1" /db_xref="GeneID:22824" /db_xref="HGNC:HGNC:17041" /translation="MSVVGIDLGFLNCYIAVARSGGIETIANEYSDRCTPACISLGSR TRAIGNAAKSQIVTNVRNTIHGFKKLHGRSFDDPIVQTERIRLPYELQKMPNGSAGVK VRYLEEERPFAIEQVTGMLLAKLKETSENALKKPVADCVISIPSFFTDAERRSVMAAA QVAGLNCLRLMNETTAVALAYGIYKQDLPPLDEKPRNVVFIDMGHSAYQVLVCAFNKG KLKVLATTFDPYLGGRNFDEALVDYFCDEFKTKYKINVKENSRALLRLYQECEKLKKL MSANASDLPLNIECFMNDLDVSSKMNRAQFEQLCASLLARVEPPLKAVMEQANLQRED ISSIEIVGGATRIPAVKEQITKFFLKDISTTLNADEAVARGCALQCAILSPAFKVREF SITDLVPYSITLRWKTSFEDGSGECEVFCKNHPAPFSKVITFHKKEPFELEAFYTNLH EVPYPDARIGSFTIQNVFPQSDGDSSKVKVKVRVNIHGIFSVASASVIEKQNLEGDHS DAPMETETSFKNENKDNMDKMQVDQEEGHQKCHAEHTPEEEIDHTGAKTKSAVSDKQD RLNQTLKKGKVKSIDLPIQSSLCRQLGQDLLNSYIENEGKMIMQDKLEKERNDAKNAV EEYVYDFRDRLGTVYEKFITPEDLSKLSAVLEDTENWLYEDGEDQPKQVYVDKLQELK KYGQPIQMKYMEHEERPKALNDLGKKIQLVMKVIEAYRNKDERYDHLDPTEMEKVEKC ISDAMSWLNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNFCNPIIYKPKPKAEVPED KPKANSEHNGPMDGQSGTETKSDSTKDSSQHTKSSGEMEVD" BASE COUNT 1092 a 606 c 720 g 866 t ORIGIN 1 gccggttgga ggcggccgaa ccgcagtagg gaaagaccca ggctgcggga cgcggtgcag 61 gctgcggcgc tgacggcctc tgctccttcc gcgggtttcc gactccctgc cctagatttt 121 ctgcttagcg acttggggtc ccctctcgtt tgcttctggt aggagtcgca atcccagcag 181 caatagccca gaagaggaca cggttcccgt accgaagggt tcagtaccag cagcccgacc 241 atcacgcggc gggatgtctg tggttggcat tgacctcggc tttctcaact gctacattgc 301 tgtcgcgaga agtggcggca tcgagaccat cgccaatgag tacagcgaca ggtgtacccc 361 ggcctgtata tcattgggat caagaactcg agccattgga aatgcagcaa agagccagat 421 agtcacgaac gtaagaaata caattcatgg cttcaaaaag cttcatgggc gatcatttga 481 tgatcccatt gtgcaaactg aaaggatcag gcttccctat gaactgcaga aaatgcctaa 541 tggaagtgca ggagttaagg tgcggtactt agaggaagag agaccttttg caattgagca 601 agttactgga atgctgttag ccaagcttaa agagacttca gaaaatgctt tgaagaaacc 661 agtggctgac tgtgtgattt caattcctag cttttttact gatgccgaga gaagatctgt 721 gatggctgca gcccaggttg caggcttaaa ttgtttaagg ttgatgaatg aaactactgc 781 agttgcactg gcgtatggaa tttataaaca ggatcttccc ccattagatg agaaaccaag 841 aaatgtagta tttattgata tgggacattc tgcctatcag gtcttggttt gtgcttttaa 901 caaaggaaaa cttaaagtct tggctactac ctttgatcca tatttgggtg gcaggaactt 961 tgatgaggct ttagtagact acttctgtga tgagttcaag accaaatata agataaatgt 1021 gaaagaaaac tctcgggcct tgttgcgttt atatcaggaa tgtgaaaaac taaagaagct 1081 aatgagtgca aatgcatcag atcttccatt gaacattgag tgtttcatga atgaccttga 1141 tgtttctagt aaaatgaaca gggctcaatt tgaacaactg tgtgcttccc ttttggccag 1201 ggttgaacca cctttaaaag cagtaatgga acaagctaac ttacaacgtg aagacattag 1261 tagtatagaa attgtaggag gagcaacacg aattcctgca gtgaaagaac aaatcactaa 1321 attctttctt aaagacataa gtaccacatt aaatgctgat gaagctgttg caagaggatg 1381 tgcgttacag tgtgcgattc tctcaccagc atttaaagtg cgtgaatttt ccataacaga 1441 ccttgttccc tattcaatca cattaaggtg gaagacctct tttgaagatg gaagtgggga 1501 atgtgaagtt ttctgtaaga accatcctgc cccattctca aaagtcatta ctttccacaa 1561 gaaggaacca tttgaactag aagcatttta tactaattta catgaagtgc cttatcctga 1621 tgcaagaatt gggagcttca ctattcagaa tgtttttcca cagtctgatg gtgatagttc 1681 caaagtgaag gttaaagttc gtgttaacat ccatggaatc ttcagtgtgg ctagcgcatc 1741 agtaattgag aagcaaaatt tggaaggcga tcacagtgat gctccaatgg agacagaaac 1801 ttcatttaaa aatgaaaaca aagataatat ggataaaatg caggttgatc aagaagaagg 1861 gcatcaaaaa tgtcatgctg aacacactcc agaagaggaa attgatcata caggagccaa 1921 aacaaagtca gctgtctcag acaaacaaga ccgattaaat cagacactta aaaaaggaaa 1981 agtcaaaagt attgatctac cgatccagag tagcctatgt agacaactag gccaagatct 2041 tctcaacagc tacattgaaa atgaggggaa gatgatcatg caagataagt tagagaaaga 2101 aagaaatgat gctaagaatg ccgttgaaga atatgtatat gattttagag acaggctggg 2161 cactgtctat gaaaaattca tcactccaga agacttgagt aaactgtctg cagtattgga 2221 agacacagaa aattggcttt atgaagacgg agaggaccaa cctaaacaag tttatgtgga 2281 taagcttcaa gaactaaaga aatacggcca gcctattcaa atgaagtaca tggagcatga 2341 agagagacca aaagccttaa atgacttggg aaaaaagatc caacttgtca tgaaagtgat 2401 agaagcttat agaaacaagg atgaaagata tgatcatctg gatcctactg aaatggaaaa 2461 ggttgaaaaa tgtatcagtg atgccatgag ttggctgaat agtaagatga atgcacagaa 2521 caaactaagt ctcactcaag atcctgtggt aaaagtttca gaaatagtag caaagtcaaa 2581 ggaactggat aatttctgta accccatcat ttacaagccc aaaccaaaag cagaagttcc 2641 tgaagacaaa ccaaaagcta atagtgaaca caatggccca atggatggac agagtggaac 2701 tgaaactaaa tcagattcaa caaaagacag ctcacagcat actaaatcct ctggagagat 2761 ggaagtggac taagtcttaa ttttaccttc acattaattc aaaccgtgca agtaaccacg 2821 gggtccatct tttacatctg gtacacacaa cagacgctca gttgttctta accacttttg 2881 tcatttgttt tttggagtag ttttgaaaag tgttttatat tgagtgcact tctgttcatt 2941 tccattgctg cttatatgca gtgttagccg aattagattt acaagacaat ctaagctttc 3001 cggataattt tatatatcaa acatacagga tggatacata gttggcaaca gtctacctta 3061 tttaaagctt ctactgggat aaacctcaat tcctttattc aggaaaggat actttattgc 3121 attattgttg cagaagcata gatttaattg catctttatt ttgaaaaaca aatgaaaatt 3181 gatggggttt aaagctacag aggcactgac ctttttctag ttattgtatt gctacaattt 3241 aaatattaaa acaaataaga gctttcccaa aaaaaaaaaa aaaa //