LOCUS BC040549 4366 bp mRNA linear HTC 09-SEP-2005
DEFINITION Homo sapiens calmodulin regulated spectrin-associated protein 1,
mRNA (cDNA clone IMAGE:5295469), with apparent retained intron.
ACCESSION BC040549
VERSION BC040549.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4366)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: m Column: 3
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4366
/db_xref="H-InvDB:HIT000096215"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5295469"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1103 a 1198 c 1275 g 790 t
ORIGIN
1 tggtgttggg cggctttgag actggggtgt ctgtccccag agctcagagc agaggtgggg
61 cggtaactcc atgcccgcgg gcacaggcgg ggtcactgag tgaggagaat ggctcgaggc
121 tgagccgtcc ctcacacggg gccagcgtgg acacttggcg tcctcccttc ggtctttgcg
181 tgtctgttgt tgagccgtgt gtgtgtgtgt gtgtgtgtgc acaagaagct ggtgcccgtg
241 tacacgctgc tctgtgacct gctgtctgca ccctgctgtc tgcacccagc agcctgtgcg
301 ggaaaggaac tgctgccttc agcccatccc atcctttatt gccactgaga cagaaacagc
361 agaaatccat acagggagag gacatccctg atcagcgaca tcgatcgaat tctttgaccc
421 gagttgatgg tcagcctcga ggagcagcaa tagcctggcc agaaaaaaaa accaggcctg
481 cgtcccagcc aacacctttt gctctacatc acgctgcgag ttgtgaagtg gatcccagct
541 ctggcgacag catcagcttg gcccgctcca tcagcaaaga cagtttggca tccaacattg
601 ttaatctgac cccacagaac cagccacacc ccacggccac gaagagccac gggaagagcc
661 tcctgagcaa tgtcagtatt gaggatgagg aagaggagct tgtggctatt gttagagcag
721 acgtggttcc ccagcaggct gacccggagt tccccagggc ctcaccccgg gccttaggcc
781 ttacagcaaa tgcccggtct ccccaaggac agctggacac ctcggaaagt aagcctgaca
841 gttttttctt ggagcctttg atgccagcag ttcttaagcc agcgaaagag aagcaggtga
901 tcaccaagga ggatgaacgg ggggaaggga gaccgaggag catcgtgtct aggaggccca
961 gcgagggccc ccagcctttg gtacgaagga aaatgactgg cagtcgcgac ttgaatagga
1021 cttttacccc gattccatgc tcagaattcc ccatgggcat cgaccccacc gagacaggac
1081 cactgtcagt ggaaaccgca ggagaggtct gtggtgggcc tctggccctt ggcggattcg
1141 atccgttccc ccagggacca tccacggatg gcttcttcct tcatgtaggc agggccgatg
1201 aagacaccga gggaaggtta tatgttagtt gttcaaaaag ccccaactcc cacgattcag
1261 agccgtggac tctcctcagg caggattctg actcggatgt ggtggacata gaggaagccg
1321 agcacgattt catgggtgag gcccatcctg tggttttcag cagatacatt ggggaggaag
1381 agtcggccaa actgcaggag gacatgaagg tgaaggaaca tgaagacaaa gatgacgcca
1441 gcggccgctc gagcccctgc ctgagcacag cctctcagat gagcagtgtc tccatggcga
1501 gtgggagcgt gaagatgacc agctttgcgg agaggaagct ccagagactc aacagctgtg
1561 agaccaagtg cagcaccagc agctcccaga agaccacgcc agatgcgtct gagagctgcc
1621 cagcccctct gacgacgtgg aggcagaaga gggagcagag tccgagccag catggcaagg
1681 atcccgccag cctcctggca tctgagctgg tacagctgca catgcagctg gaggagaagc
1741 gcagggccat cgaggcccag aagaagaaga tggaggcgct gtcggcaagg cagcgcctga
1801 agctcggcaa ggctgcattc ctgcatgtgg tgaagaaggg caaggccgag gctgccccac
1861 ccctcaggcc ggagcacttt gcaaaggagt actctcagca caacggggag gactgtgggg
1921 acgctgtttc caaaaccgaa gactttctcg tgaaggagga gcagagagag gagctccttc
1981 acgagccaca ggatgtggac aaagagagcc tggcctttgc tcagcaacat aaagcaaaag
2041 accctgtggc tctgcacgag ctggagagaa ataaggtgat ctccgctgcc ctcctggagg
2101 acactgttgg ggaggttgtc gacgtgaatg aatgtgacct ttccatcgag aagcttaacg
2161 aaaccatcag tacgctgcag caggccatcc tgaaaatctc tcagcagcaa gagcagcttc
2221 tgatgaagtc ccccacagtc ccagtgccag gctctaagaa taactcgcag gaccacaaag
2281 tgaaggcacc agtccacttc gtggagccac tctctcccac gggcgtggct ggccaccgca
2341 aagccccccg gctgggtcaa ggccggaatt cccgttccgg aaggccggcg gagctgaagg
2401 tcccaaaaga caggccacag ggctcctccc gaagtaaaac cccaacgccc agtgtagaga
2461 cgctcccgca cttgagaccc ttccctgcca gcagccaccc tcggacgccc acggaccctg
2521 gcctggacag tgccctggag cccagtggtg acccacatgg gaagtgtctc ttcgacagtt
2581 acaggctcca tgatgaaagc aatcagcgga cacttactct gtcctcttcc aaagatgcca
2641 acattctttc ggagcagatg agcctcaaag aagttctgga tgcgagtgtg aaggaggtgg
2701 ggtccagctc ctcagatgtc tcgggaaaag agagcgtccc cgtggaggag cctctgagga
2761 gcagggccag cctcattgaa gtggacctct ccgacctgaa ggcccccgac gaggatgggg
2821 agctggtaag cctcgatggc tcggcggacc ttgtcagcga aggcgaccag aagccggggg
2881 tcggcttctt cttcaaggat gaacagaaag cggaagatga gctcgccaag aagcgggcgg
2941 ccttcctcct gaagcagcag cgcaaggccg aggaggcccg cgtgcgcaag cagcagctgg
3001 aagcggaggt ggagctcaag cgtgacgaag cccggcgcaa agctgaggaa gaccgggtgc
3061 ggaaggagga ggagaaggcg cggcgcgagc tcatcaagca ggagtacctg cggaggaagc
3121 agcagcagat cctagaggag caggggctcg gcaagcccaa gtcaaagccg aagaagccgc
3181 ggccgaagtc ggtgcaccgg gaagagtcgt gcagcgactc cggcaccaag tgctcctcca
3241 cccctgataa cttgagccgg actcagtcag gctccagcct gtccttggcc tctgcggcga
3301 cgacagaacc cgagagcgtt cattccgggg gcacaccctc tcagcgagtg gaatcgatgg
3361 aagccctgcc catactgagc cgtaacccaa gcaggagcac agaccgagac tgggagaccg
3421 cgtcggcggc atcttccctg gcctcagtgg ccgagtacac aggtcccaag ctctttaagg
3481 agcccagtag taaatcaaac aagccgatta ttcacaatgc catatcccat tgctgcctgg
3541 ctggaaaagt gaacgaaccc cacaagaatt ccatattgga ggagctggag aagtgtgatg
3601 ccaatcacta catcatactg tttcgtgatg ctggctgcca gttcagggcg ctttactgct
3661 actatcctga tactgaggaa atctacaaac tcactggcac ggggccaaag aacatcacca
3721 agaaaatgat cgacaaactg tataaataca gctcagaccg aaaacagttt aacttgatcc
3781 cagccaaaac catgtctgtc agtgtggacg cactcacaat ccacaaccac ctgtggcagc
3841 ccaagcggcc tgcagtgcca aagaaggccc agactcgtaa atgaccccgg tgcagctggc
3901 gtccaaaggg tgacccagac tcgtaaatga tgcccttgtg gctggcatcc agagggtgcc
3961 acggggtcct tatttattgt tttcatctat ttgggtacga agtgtgcaaa gtcacagacc
4021 ttttgcaaag aggtttctag acagcagaag aaaacccctc tctcagcgct catctcacgc
4081 agaggatgcc aggcaggaaa aagtttacgg aaaacaccag ttcactaaaa gcaccgaaat
4141 ctgcaaagcc tgtcttccgc tagaacaacg tctacaaatg tgaagatgat gacttctggc
4201 acgcggtcat gagggtgggg aatggcacta ggagctgatg tttgcctcat ttaaagtagg
4261 caagccgagc caactgcagc catcattcat taagttttgg gtagtgctct aatggtttgt
4321 tcactttaat aaagacagat tttggtaaag caaaaaaaaa aaaaaa
//