LOCUS BC040548 4479 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens KIAA1370, mRNA (cDNA clone MGC:39759 IMAGE:5288206), complete cds. ACCESSION BC040548 VERSION BC040548.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4479) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4479) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 63 Row: l Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 55742690 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..4479 /db_xref="H-InvDB:HIT000096214" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39759 IMAGE:5288206" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4479 /gene="KIAA1370" /db_xref="GeneID:56204" /db_xref="HGNC:HGNC:25609" CDS 307..3198 /gene="KIAA1370" /codon_start=1 /product="KIAA1370 protein" /protein_id="AAH40548.1" /db_xref="GeneID:56204" /db_xref="HGNC:HGNC:25609" /translation="MKPDRDTLDEYFEYDAEEFLVSLALLITEGRTPECSVKGRTESF HCPPAQSCYPVTTKHECSDKLAQCRQARRTRSEVTLLWKNNLPIMVEMMLLPDCCYSD DGPTTEGIDLNDPAIKQDALLLERWILEPVPRQNGDRFIEEKTLLLAVRSFVFFSQLS AWLSVSHGAIPRNILYRISAADVDLQWNFSQTPIEHVFPVPNVSHNVALKVSVQSLPR QSNYPVLTCSIHTNIGLYEKRIQQHKLKTHQHHNPNEAEQCGTNSSQRLCSKQTWTMA PESVLHAKSGPSPEYTAAVKNIKLYPGTGSKSDHGTSQANILGFSGIGDIKSQETSVR TLKSFSMVDSSISNRQSFWQSAGETNPLIGSLIQERQEIIARIAQHLIHCDPSTSHVS GRPFNTQESSSLHSKLFRVSQENENVGKGKEAFSMTFGSPEFSSPEDTNEGKIRLKPE TPRSETCISNDFYSHMPVGETNPLIGSLLQERQDVIARIAQHLEHIDPTASHIPRQSF NMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLIPNKCFT SFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDL TSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKND SKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSD QLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCEQPKNTEVLRTTLKHSNVWRKHNFH SLDGTSTRAFHPQTGLPLLSSPVPQRKTQSGCFDLDSSLLHLKSFSSRSPRPCLNIED DPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGFTAEVGASGAFCPTH LTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRGYRVPPSGTIQVVCVL" BASE COUNT 1457 a 864 c 857 g 1301 t ORIGIN 1 gggattctgt gtaaacttgg ccgcggttgc cgcaggaagg ctagccagag ggtaattaca 61 caggtgaggc ccggcggggc gggcggaggg ctcgggaggc gcaggggact ggaagagttg 121 gctgcgccca ggcaccaggt ggaagaattt ccataccagc cctgcggagg tgcctctgtt 181 tccagaggcg tttttgtacg aagggcattt tgaaagcgaa gcagaagccg tagaatcagc 241 ggcgagcctg ttgaaagaac ccacaggtgc atttcacagc actctgggcg aaaattggat 301 gtgaaaatga agccagaccg agatactctg gatgaatatt ttgaatatga tgcagaggag 361 ttcttggtct ctttggcctt gctgataaca gaaggacgaa cacctgaatg ttctgtaaaa 421 ggtcgaacag aaagctttca ttgccctcca gcacagtctt gttacccagt aactaccaaa 481 catgaatgta gtgacaagct ggcccagtgc cgccaagcca gacgaactag gtctgaggtc 541 acattgttgt ggaagaataa ccttccaatc atggtggaaa tgatgctact accagactgc 601 tgctacagcg atgatgggcc caccacagag ggaattgatc taaatgatcc tgcgattaag 661 caagatgcat tattattaga aagatggatc ttggagccag ttcctcgaca gaatggtgac 721 cgatttattg aagagaagac gcttctgttg gctgtccgct catttgtgtt tttttctcag 781 ttaagtgcat ggctgagtgt ttctcatggt gctattccac gaaatattct ctacagaatc 841 agtgctgctg atgtagacct acagtggaat ttttcacaga ctccaattga gcatgtgttt 901 cctgttccca atgtttctca caatgttgcc ttgaaagtca gtgttcagtc cttgcccaga 961 caatctaatt atccagtttt gacgtgcagt attcacacta atattggcct ttatgagaaa 1021 agaattcaac aacataaact taaaactcat cagcaccata acccaaatga agcagaacaa 1081 tgtggtacaa acagttcaca gcgtctgtgt agcaaacaga cttggaccat ggcacctgaa 1141 agtgtgttac atgcaaaaag tggcccaagt ccagaatata ctgcagctgt caaaaatatc 1201 aaactatatc caggcactgg cagtaaatct gaccatggga catctcaagc caatattcta 1261 ggctttagtg gtataggtga tataaaatca caagaaacat cagtgagaac tttaaaatca 1321 ttttcaatgg ttgattccag tatctctaac cgccagagtt tctggcagtc agctggtgag 1381 actaaccctt taataggctc tttaattcag gagcggcaag aaatcattgc aagaattgct 1441 caacatttga ttcattgtga tccaagcact tcacatgttt ctggacgtcc atttaatact 1501 caagagtcta gttcactcca ttcaaaactt ttccgggttt cacaagaaaa tgagaacgtg 1561 ggaaaaggta aagaagcttt ctccatgact tttggtagtc cagagtttag ttccccagaa 1621 gacaccaatg aggggaaaat tcgactaaaa ccagaaactc ctcgaagtga aacttgtatt 1681 tctaatgact tttattctca tatgcctgtt ggagagacta atcctttgat aggctcttta 1741 ctccaggagc ggcaagatgt tattgcaagg attgctcagc acttggagca cattgatcca 1801 acagcatcac atatcccccg gcagtcattc aacatgcatg actccagttc ggttgcatct 1861 aaagtgttta ggagttcata tgaagacaaa aatttgttga agaaaaataa ggatgagtcc 1921 tcagtttcca tttctcacac aaaatgttcc ttgttaggag acatcagtga tgggaaaaac 1981 ttaataccta ataaatgttt tacttctttt aaaaataata gtaaagaaaa gtgttctttg 2041 aaacatcaaa caagaaatca gtgtcagaac aatcctagtg aaatcatcca aagtacgtat 2101 caggagacac agaacaaaag ttctagttta tcaacttcct caattttgtc tcagcacaaa 2161 gaaaataact tagatttgac aagcagattc aaggagcaag aaatgagcaa tggaattgat 2221 aaacagtatt caaattgcac cactattgac aaacagattt gtacaaataa gtataaggaa 2281 aaaataataa atgagaacta taatccaaaa ttctttggca atcttcagtc tgatgattcc 2341 aaaaaaaatg actcaaaaat aaaagttact gtgttggaaa tgtctgaata tttgaacaaa 2401 tatgaaagca tgtcctcaaa taaagactca aaaaggccta agacatgtga gcaaaatact 2461 caacttaata gcatagagaa ttatctcaat aaagataatg aaggtttcaa atgtaaaaag 2521 tcagaccaat taaaaaatga acaagataag caagaagatc caactaatga aaaatcgcaa 2581 aactattctc agagaagaag tataaaagac tgtttgtcta catgtgagca accaaaaaat 2641 acagaggtat tgaggactac actgaaacat tcaaatgtgt ggcgaaaaca taattttcat 2701 tccttggatg gaacttcaac cagagccttt catcctcaaa ctggattgcc tcttctttca 2761 agccctgttc ctcaaagaaa aacacaatca ggttgctttg atctggattc ttcattacta 2821 catctgaaaa gcttctcatc tagaagtcct cgaccatgtt taaacattga agatgatcca 2881 gatattcatg aaaaaccatt tttgagttct agtgctccac ctataacaag tcttagtctc 2941 ctaggaaatt ttgaggaatc tgtcttgaac tatcgtttcg atcctctcgg cattgttgat 3001 ggttttactg ccgaggtagg ggcaagtggt gctttctgcc ccacacattt gactcttcca 3061 gttgaagtgt cattctacag tgtttcagat gacaatgctc cctctcctta tatgggtgtg 3121 attactttag agtcccttgg taaaaggggt tatcgagtac ctccttcagg aacaatacaa 3181 gtggtatgtg ttttatagcc tacaattgca ataatcattc tctcacatac atatagaact 3241 tagccctttc tcctgctact gctgctgcaa caactttgac cttatttaat cctaataaga 3301 ctgtggtgaa gatgtttgtt gtgatatatg atttacgaga tatgccagcc aatcatcaga 3361 cattcctacg acaaagaact ttttctgtac ctgttaaaca agaagtgaag agaagtgtta 3421 ataaagagaa catccgacac acagaagaac ggttattacg ctacctcata catctgaggt 3481 tccagagttc taaatctgga aagatctacc tccatagaga cgtacggctc ctgttctcta 3541 gaaagtcaat ggaggttgat agcggtgctg catatgaact caaatcttac actgaatcac 3601 caacaaaccc tcagttttca ccaagatgtt gataaggagt gatgatttaa agtatttact 3661 cagtacacaa gtttgcaagt aaaaattagc atagaatgga gtgtaccaaa ttaacaatca 3721 ggagagtgga ttctctcctg ttatcctgga ccagttttta tgaaaggatt cctgaaatga 3781 aatccatata ttccatgtag actggaaaaa ctcatgtcct aatccttttt gtactgttga 3841 aaccacttca ttggacatgt tgcaatagca aaacccccag ttagattagt gtttacacat 3901 tttctcagtt atttaatatt taatgttttc cttaatactc aagtgatgtt tgtctctagt 3961 gttctaatgt agcacaaatc ctatgtaaaa tcatactatg tatttttgac attaatgttg 4021 aaatcaaata tatgcacaag tctttaattt tgtgtaatgt gttaagtgct gttcatttaa 4081 gttattgaaa atgagaataa aatgttgagc ttctttaaaa gtaacacact atgcaagcat 4141 gtgtactttt tatatctctc atgtttagtt tttataacac catatccagg ttgctatctc 4201 acatagtagt cctttaacat attgtattag cagtgcaatg tggactaagc tgcttcactt 4261 tccctttgca agttcagatc atcatgccca ttcatagcca ggattcctta tccccaaaac 4321 agttctattt ttccttaatc actactatag agtctttaca ttaaattact gtcgtatgct 4381 agataatttt ctcaaattgt taaaagaata tgtactttgg aaacaaatta gtatttatat 4441 tgtaaatata ttcaaaaaaa actaaaaaaa aaaaaaaaa //