LOCUS BC040533 2480 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens discs, large homolog 4 (Drosophila), mRNA (cDNA clone
IMAGE:5261586), partial cds.
ACCESSION BC040533
VERSION BC040533.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2480)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2480)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2480
/db_xref="H-InvDB:HIT000096206"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5261586"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2480
/gene="DLG4"
/gene_synonym="PSD95"
/gene_synonym="SAP90"
/db_xref="GeneID:1742"
/db_xref="MIM:602887"
CDS <1..1650
/gene="DLG4"
/gene_synonym="PSD95"
/gene_synonym="SAP90"
/codon_start=1
/product="DLG4 protein"
/protein_id="AAH40533.1"
/db_xref="GeneID:1742"
/db_xref="MIM:602887"
/translation="GGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVG
LEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSY
LGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEG
IFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK
PEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCGFLSQA
LSFRFGDVLHVIDASDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLKAKDWGS
SSGSQGREDSVLSYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTT
RPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKH
CILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQE
FTECFSAIVEGDSFEEIYHKVKRVIEDLSGPYIWVPARERL"
BASE COUNT 542 a 714 c 714 g 510 t
ORIGIN
1 gggggcgtag ggaaccagca catcccagga gataatagca tctatgtaac aaagatcatc
61 gaagggggtg ctgcccacaa ggatgggagg ttgcagattg gagacaagat cctggcggtc
121 aacagtgtgg ggctagagga cgtcatgcat gaagatgctg tggcagccct gaagaacacg
181 tatgatgttg tctacctaaa ggtggccaag cccagcaatg cctacctgag tgacagctat
241 gctcccccag acatcacaac ctcttattcc cagcacctgg acaatgagat cagtcacagc
301 agctacctgg gcaccgacta ccccacagcc atgaccccca cttcccctcg gcgctactct
361 ccagtggcca aggacctgct cggggaggaa gacattcccc gagaaccgag gcgaattgtg
421 atccaccggg gctccacggg cctgggcttc aacatcgtgg gtggcgagga cggtgaaggc
481 atcttcatct cctttatcct ggccgggggc cctgcagacc tcagtgggga gctgcggaag
541 ggggaccaga tcctgtcggt caacggtgtg gacctccgaa atgccagcca tgagcaggct
601 gccattgccc tgaagaatgc gggtcagacg gtcacgatca tcgctcagta taaaccagaa
661 gagtacagcc gattcgaggc caagatccac gaccttcggg aacagctcat gaacagcagc
721 ctgggctcag ggactgcgtc cctgcggagc aaccccaaaa ggggtttcta catcagggcc
781 ctgtttgatt acgacaagac caaggactgc ggcttcctga gccaggccct gagcttccgc
841 tttggggatg tgctgcatgt catcgatgct agtgatgagg agtggtggca ggcacggcgg
901 gtccactctg acagtgagac cgacgacatt gggttcatcc ccagcaaacg gcgggttgag
961 cgacgagagt ggtcaaggtt aaaggccaag gactggggct ccagctctgg atcgcagggt
1021 cgagaagact cggttctgag ctacgagaca gtgacgcaga tggaagtgca ctatgctcgc
1081 cccatcatca tccttgggcc caccaaggac cgcgccaacg atgatcttct ctccgagttc
1141 cccgacaagt ttggatcctg tgttccccat acgacacggc ccaagcggga gtatgagata
1201 gatggccggg attaccactt tgtgtcgtcc cgggagaaaa tggagaagga cattcaggcg
1261 cacaagttca ttgaggccgg ccagtacaac agccacctct atgggaccag cgtccagtcc
1321 gtgcgagagg tggcagagca ggggaagcac tgcatcctcg atgtctcggc caatgccgtg
1381 cggcggctac aggcggccca cctgcacccc atcgccatct tcatccgccc ccgctccctg
1441 gagaatgtgc tagagattaa caagcggatc acagaggagc aagcccgcaa agccttcgac
1501 agagccacaa agctggagca ggagttcaca gagtgcttct cagccatcgt ggagggtgac
1561 agctttgagg agatctacca caaggtgaag cgtgtcatcg aggacctctc aggcccctac
1621 atctgggttc cagcccgaga gagactctga ttcctgccct ggcttggcct ggactcgccc
1681 tgcctccatc acctgggccc ttggtctgga ctgaattgcc caagcccttg gctccccccg
1741 gcctccctcc caccccttct tatttatttc ctttctaact ggatccagcc tgttggaggg
1801 gggacactcc tctgcatgta tccccgcacc ccagaactgg gctcctgaac gccaggaacc
1861 tggggtctgg gggggagctg ggctccttgt tccgagccct tgctccttag gatccccgcc
1921 cccacctgcc cccaatgcac acacagaccc accgggggcc acctgccctc ccccatcctc
1981 tcccacacac attccagaag tcagggcccc ctcgaggagc accagctgca gggatgcagg
2041 gccacaggcc tccgctctct cctaaggcag ggtctggggt cacccctgcc ctcatcgtaa
2101 ttccccatgt tccttgattt ctcatttatt ttttccactt tttttcttct caaaggtggt
2161 tttttggggg gagaagcagg ggactccgca gcgggcccct gccttccaca tgcccccacc
2221 atttttcttt gccggtttgc atgagtggaa ggtctaaatg tggctttttt tttttttttt
2281 ttcctgggaa tttttttggg gaaaagggag ggatgggtct agggagtggg aaatgcggga
2341 gggagggtgg ggggcagggg tcgggggtcg ggtgtccggg agccagggaa gactggaaat
2401 gctgccgcct tctgcaattt atttattttt ttcttttgag agagtgaaag gaagagacag
2461 atacaaaaaa aaaaaaaaaa
//