LOCUS BC040490 3346 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens acetoacetyl-CoA synthetase, mRNA (cDNA clone MGC:33696
IMAGE:5295926), complete cds.
ACCESSION BC040490
VERSION BC040490.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982926.
FEATURES Location/Qualifiers
source 1..3346
/db_xref="H-InvDB:HIT000096188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33696 IMAGE:5295926"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3346
/gene="AACS"
/gene_synonym="FLJ12389"
/gene_synonym="SUR-5"
/db_xref="GeneID:65985"
/db_xref="HGNC:HGNC:21298"
CDS 207..2225
/gene="AACS"
/gene_synonym="FLJ12389"
/gene_synonym="SUR-5"
/codon_start=1
/product="acetoacetyl-CoA synthetase"
/protein_id="AAH40490.2"
/db_xref="GeneID:65985"
/db_xref="HGNC:HGNC:21298"
/translation="MSKEERPGREEILECQVMWEPDSKKNTQMDRFRAAVGAACGLAL
ESYDDLYHWSVESYSDFWAEFWKFSGIVFSRVYDEVVDTSKGIADVPEWFKGSRLNYA
ENLLRHKENDRVALYVAREGKEEIVKVTFEELRQEVALFAAAMRKMGVKKGDRVVGYL
PNSEHAVEAMLAAASIGAIWSSTSPDFGVNGVLDRFSQIQPKLIFSVEAVVYNGKEHN
HMEKLQQVVKGLPDLKKVVVIPYVSSRENIDLSKIPNSVFLDDFLATGTSEQAPQLEF
EQLPFSHPLFIMFSSGTTGAPKCMVHSAGGTLIQHLKEHLLHGNMTSSDILLCYTTVG
WMMWNWMVSLLATGAAMVLYDGSPLVPTPNVLWDLVDRIGITVLVTGAKWLSVLEEKA
MKPVETHSLQMLHTILSTGSPLKAQSYEYVYRCIKSSILLGSISGGTDIISCFMGHNF
SLPVYKGEIQARNLGMAVEAWNEEGKAVWGESGELVCTKPIPCQPTHFWNDENGNKYR
KAYFSKFPGIWAHGDYCRINPKTGGIVMLGRSDGTLNPNGVRFGSSEIYNIVESFEEV
EDSLCVPQYNKYREERVILFLKMASGHAFQPDLVKRIRDAIRMGLSARHVPSLILETK
GIPYTLNGKKVEVAVKQIIAGKAVEQGGAFSNPETLDLYRDIPELQGF"
BASE COUNT 745 a 887 c 956 g 758 t
ORIGIN
1 ggcctgcggg gcggggcctg ggccaagcgg cccgcaggag gcggcggcgg ccgttcagtc
61 ccttgttccc cgccgccgcc gtcgctgacc cagcccgcca ggcgctcctg accgtcgctt
121 cctccggtcc caggtccccg gccctcgcct cagccccggc ccctggtccc cagccctcgt
181 cgcagccccg gccgcccgcc gccgccatgt ccaaggagga gcgccccggt cgggaggaga
241 tcctggagtg ccaggtgatg tgggagcctg acagtaagaa gaacacgcag atggaccgct
301 tccgggcggc tgtgggcgcc gcctgcggcc tggcgctgga gagttatgat gacttgtacc
361 attggtccgt tgagtcatat tcagacttct gggcagagtt ctggaaattc agtggaattg
421 tcttctcacg tgtgtatgat gaggttgtgg acacatcgaa aggaatcgca gatgtccccg
481 agtggttcaa aggcagtcgg ctcaactatg cagaaaacct cctgcggcac aaagagaatg
541 acagagttgc cctttacgtt gcaagggaag gcaaagagga aattgtgaag gtgacttttg
601 aagagctgag gcaagaagtg gctttgtttg cagcagcaat gaggaaaatg ggtgtgaaga
661 aaggagatcg ggttgttggt tatttaccca acagtgagca cgctgtcgag gcgatgctgg
721 ctgcggcaag cattggtgcc atctggagct ccacgtcccc ggacttcggt gtgaatggtg
781 tgctggaccg gttttctcaa attcagccaa agctcatctt ctctgtggag gctgttgtct
841 ataatggcaa agagcacaac cacatggaaa agctgcagca ggtggttaaa ggcctaccag
901 acttgaagaa agtggtggtg attccttatg tgtcctccag agagaacata gacctttcaa
961 agattccaaa cagtgtgttt ctggatgact ttcttgccac cggcaccagt gagcaggccc
1021 cgcagctgga gttcgagcag ctgcccttca gccacccact gttcatcatg ttctcatcgg
1081 gcaccacggg cgcacccaag tgcatggtgc attccgctgg gggcaccctc atccagcatc
1141 tgaaggagca cctgctgcac ggcaacatga ccagcagtga catcctcctg tgctacacca
1201 cggtcggctg gatgatgtgg aactggatgg tgtcccttct ggccacagga gcggccatgg
1261 tcttgtacga tggctccccc ctggtgccca cgcccaatgt gctctgggac ctggttgaca
1321 ggataggcat cactgtcctg gtaactgggg ccaagtggct gtcagtgctg gaagagaagg
1381 ccatgaagcc ggtggaaacc cacagtctcc agatgctcca cacgatcctg tccactggct
1441 ccccactgaa agcccagagc tacgagtatg tctacaggtg catcaagagc agcatcctcc
1501 tgggctccat ctcaggaggc accgacatca tctcctgctt catgggccac aatttttctc
1561 ttcctgtgta taaaggggag attcaggccc ggaacctggg catggccgtg gaagcgtgga
1621 acgaggaagg aaaggcggtc tggggagaga gcggcgagct ggtgtgtact aagccgatcc
1681 cttgccagcc cacacacttc tggaacgatg agaacggcaa caagtacagg aaggcgtatt
1741 tctccaaatt cccaggtatc tgggctcatg gcgactactg cagaatcaac cccaagaccg
1801 ggggcatcgt catgcttggc cggagtgacg gcaccctcaa ccccaacggg gtgcggttcg
1861 gcagctcgga aatctataac attgtggaat ccttcgagga ggtggaggac agcctgtgtg
1921 tcccccagta taacaagtac agggaggaga gggtgatcct cttcctgaag atggcctccg
1981 ggcacgcctt ccagcctgac ttggttaaga ggatccgtga cgccatccgc atgggcttgt
2041 ctgcgcgaca cgtgcccagc ctcatcctgg aaaccaaggg catcccgtat acgctcaacg
2101 gcaagaaagt ggaagttgcc gtcaaacaga tcatcgctgg aaaagccgtg gagcaaggag
2161 gtgctttctc gaaccccgag accctggatc tgtaccggga catccctgag ctgcagggct
2221 tctgagtcag actggctggc gtgtcactca gccgcacccg tgtgcactgt aacttttgtg
2281 tgctcaagaa attatacaga aacctacagc tgttgtaaaa ggatgctcgc accaagtgtt
2341 ctgtaggctt ggggagggat cgtttctctg ttttgttaaa tctggtgggt acctggatct
2401 tccacacgag tgggattctg gccttcagag accaggaggg agtgtctggg ccgcaggtgt
2461 ggcactgtgg tgagagtgtg tgtctttgca cacacagtgc agcgggaacg gtggggctgg
2521 ctggtgctga agacagacac actcctgagc caaggtcttg tcttcaacct ccccgtcccg
2581 ttgtcccatt ttgctctgtg aaggtgcaaa tccctttctt cccttcccat ctcaggctct
2641 cctgttttcc ctcagggtcc agtatgcctt tgagctttag ctgttagaaa ggaacccccg
2701 tgacttgaca cagctttcac agctggctgc taggaccggc gggctgggtg ttcacgtgtg
2761 tctgtgtcat ggatgcaatg caggccctgg aggactgtgc gtcacccgtc aaccagagcg
2821 tgcctccggg ccagcttccc tccaaggaat gagtggattt catacaggat ctctttattg
2881 cacagactga atggctttac atgtttctaa tgtgaattag gcatgtgaag cagtgggtgt
2941 ccacccgtgt ccctcatggg tgagccctcc agctgtgagc ccaggcagtg tggtcaccga
3001 gtgaggaccc tcctcaccag gaaccgcatc cctgtgctgc ctccacctga gagttgctag
3061 ggggttcttg tcgagatcat gtcatcagca cccctaagtc aagtcacggg tttccatagc
3121 caggcagttg gtatgtacaa ttcagttcag cgtatgaact tgtatctcta atctgatgtc
3181 catttttata ttttttgaaa ctgagcacaa tgaaatcctt tcttgaatca ttttcctttt
3241 ggattataaa aatatggggg aaagtgctat gatgaatttt atgcaataaa tgtatacatg
3301 tgtgcacatg caaaaaaaaa aaaaaaaaaa taaaaaaaaa aaaaaa
//