LOCUS BC040488 3976 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens coiled-coil domain containing 117, mRNA (cDNA clone MGC:33378 IMAGE:5272169), complete cds. ACCESSION BC040488 VERSION BC040488.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3976) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3976) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: c Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27735132. FEATURES Location/Qualifiers source 1..3976 /db_xref="H-InvDB:HIT000052402" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33378 IMAGE:5272169" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3976 /gene="CCDC117" /gene_synonym="dJ366L4.1" /gene_synonym="FLJ33814" /db_xref="GeneID:150275" /db_xref="HGNC:HGNC:26599" CDS 132..971 /gene="CCDC117" /gene_synonym="dJ366L4.1" /gene_synonym="FLJ33814" /codon_start=1 /product="coiled-coil domain containing 117" /protein_id="AAH40488.1" /db_xref="GeneID:150275" /db_xref="HGNC:HGNC:26599" /translation="MAALGRPFSGLPLSGGSDFLQPPQPAFPGRAFPPGADGAELAPR PGPRAVPSSPAGSAARGRVSVHCKKKHKREEEEDDDCPVRKKRITEAELCAGPNDWIL CAHQDVEGHGVNPSVSGLSIPGILDVICEEMDQTTGEPQCEVARRKLQEIEDRIIDED EEVEADRNVNHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPELL SDKPKPSSNTKNYTGESQAKHVAAGTAFPQRTELFSEPRPTGMSLYNSLETATSTEEE MEL" BASE COUNT 1121 a 743 c 888 g 1224 t ORIGIN 1 agaaggcgtg acgtggggtc gagagcggga tccgaggctg gcgagttttg gcagtagctg 61 tggctgcggc tgccgggcct ggggacgcgg gcggccgagg ccgccgtcgc agcctcctcg 121 tctcgccggc tatggctgcg ctcggccggc ccttcagcgg cctccctctg agcggcggct 181 cggacttcct gcagccgccg cagccggcct tccccggccg ggccttcccg ccgggggctg 241 acggcgccga gttggccccg cggccgggac ctcgcgcagt ccctagcagt cccgctggga 301 gtgcggcgcg cggacgtgtt tctgttcact gtaaaaagaa acacaagcga gaggaggagg 361 aggatgatga ttgtccagta agaaagaaaa ggataactga agcagagctc tgtgctggtc 421 ctaatgactg gattctttgt gcacatcagg atgtagaggg gcatggagta aatcccagtg 481 ttagtggcct ttccatacct gggatattag atgttatttg tgaagaaatg gatcagacaa 541 ctggagaacc acagtgtgaa gttgcccgaa ggaagcttca ggagattgag gacaggataa 601 ttgatgaaga tgaagaagtt gaagctgaca gaaatgttaa ccatctcccc agtcttgtcc 661 tttctgatac catgaaaaca ggtttgaaga gggaatttga tgaggttttt acaaagaaaa 721 tgattgagtc tatgagccgt ccttccatgg agcttgttct ctggaaaccc ctccctgaac 781 tcctttctga taagccaaag ccatcctcta atactaagaa ctatacagga gagagccaag 841 ctaagcatgt agctgctggc actgccttcc ctcagagaac tgaactgttt tcggaacctc 901 ggccaacagg gatgtctctt tataatagtt tggagacagc tactagcaca gaagaagaga 961 tggaactcta gaaaccaatt tctacactaa agttgtcaaa tgttagaaga atcctgtgtt 1021 cagttatgag actctttgca tagtataggg acttgaaagt tttatgagac gggtgtaata 1081 atatctccac ctgtgatttg ggggtgggac tcttattttg ggtagccatt tattgacttc 1141 acctttttgc caaggacgtt tgtctcaagg gaaaagcagt tttctgtggg gcttattaaa 1201 ggaatgttgg tttacattgt cttcaaagac aagtatagaa gctgtatgtg taagggtgac 1261 ttaaatcata tgtcacattg tctaaactat tcagacactt ggagaatatt ctccttgaat 1321 taaaaaagat gattaagaag gatgctccta caactgtatg ctgacagtta agtcacagct 1381 taatgtgtag atatgagctg tttacagtgg tgactatata taattgggga gaagaaggga 1441 agagagcagc agtagcttaa gcctgttgct aagaaattta atttcttagc aacttgtaat 1501 ttagttatca attcaatata gctctgttga ttaaatagcc gatagtattg tggctctcct 1561 ctttgactat gaaaatatag agaaagtttt ttctttaagg cttttttgcc ttgtgccact 1621 gttgctcctt ggtttccctt gcgtaattga taagcccagt tattcagtaa tgtttacaaa 1681 ttaattgact ttgatagtta aaagattatg aggtaaccca tctgcaattt gcctgtggga 1741 gaagcatcct ttagttcatc ttaaggaagt gctttatcag ctaaacccaa cattgataac 1801 tttggtaatt tttttaaaaa gttatacttg tattagcaag tttttttttt ttttccccca 1861 ccgcaacctc catctcccgg gttcaagcaa ttctcctgcc tcaccctccc aagtagctgg 1921 gattacaggt gcccacctcc acgcccagct aatttttgta tttttaatag agaccggttt 1981 tgccatgttg gccaggctgg tctcgaactc ctgacctcag gtgatctgcc caccccagcc 2041 tcccaaaatg ctgggattac aggcgtgagc cacggcacgc agccagcaag ttgtttttaa 2101 atgttaatat agaaaacagt gaaggattag ctgaaaatat atgagcaggt gacattgagg 2161 tttactgaaa tagccaattt gactggtgct tagactattg tgcagtaaac ctaaaaggta 2221 gtggagaatt gcttcctgct agcaggaagc cttcatcttc ttgagtaccc aaaccaggct 2281 tcaggtgtcc tttgaggata gccaggtttg aaatttttag tttctcagga agagctcttc 2341 tatgtggcag gggctgatag ggcaaaataa aatgacaatt tctttattgc tacagagtat 2401 cctctataag ttattaaacg agtgtaatgg tataatgccc ttccatcaca caacaggaca 2461 ccaccccagt tttgttttct gggtttcttc cccctttgta ggaatcagat accttttgta 2521 gaaaaaaatg gcttatgcca cgtaaaggtg aatttttaga aaccaccttc taggcgtttt 2581 tggaaccctt actgaaatcc ctccccttgt tacagatggc gtagaagtca caagtctgtt 2641 aattggactg ttgcttcttt gcctgttcct gctttctctt tctgtctgga tagtcaggaa 2701 aagatttaat gtttaatatt taaacaaaat atttaatgtc tatacagtaa aattattcaa 2761 acttcaaacc agtattgaaa gcagttggaa accagctaat agtttcttaa tctcagattt 2821 cgagatgaat gtaaactgta ttcttttgaa atgtgcaagt gtttgattca tgccatttga 2881 taaacttctg ccttgtagtc attgtttgat gggaccaact tgtaaagtat gagccttaaa 2941 taaatctcca tgctgaaaaa tgtgttctaa tgcaacacaa aaacatgaag tgactgccca 3001 gaggtagagt tagtgtttag gtggaaaggg agatgacagc tttccaaaga aggacctaaa 3061 acacaccaag attgtcttct acaggaattg ctgggcaggt ctccgactaa aggtcttatg 3121 atgaaaagga agaaacaagc ccccaacaca aggctctgat actactggta aatgtaggag 3181 agaattaaga atctgttaat taaaatccaa acagagctta tttcagtagt caagttacct 3241 gacatgataa ttatttctgc aggataattg atgttttatg ttcttttttg gactttatct 3301 tcttgcaaaa atttctacaa aaattgtttt cttcatcctt gtggtgctta ttcatctgag 3361 ccgtctccac agtcccaatg cctctgcttt ttgttttact tttgtagcat aaggtttttg 3421 cttttgcttt gccttaagag ttccctaggg agttaccagg gcttttcgtt ttgtgtagct 3481 tttgcagcat ggatcaaaca ttggcttact gtgctaatgt gtgaagagaa aaaattctct 3541 aaagcaggtg agctttaatg aacaaatgtg tattttatct gagtttgagt agggtgcgtt 3601 gtggattttg ttttttgggt tttttttttt ttttgtaatt atatgaagaa agtccagttc 3661 tcataaatat tgatcactta aaaaacttac tctttcttga aaaggtacac atgtaaaatt 3721 taggaaaata actaaagtag gggctggaac cataagaaga atgtttatca gcacgttcat 3781 ttattatttt ggatttggaa cttggctttg tttttcaata gtgacaagaa tggttcagtt 3841 ctaggaatgt tctggaagat gctgttaatt ttactttaaa atgagaatct ggtgttactg 3901 tattttatcg ttttcaataa aacttcttaa gtgttaaaaa aaaaaaaaaa aaaaaaaaat 3961 aaaaaaaaaa aaaaaa //