LOCUS BC040438 1849 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens C1q and tumor necrosis factor related protein 9, mRNA
(cDNA clone MGC:48915 IMAGE:5227612), complete cds.
ACCESSION BC040438
VERSION BC040438.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1849)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1849)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: e Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 65301114.
FEATURES Location/Qualifiers
source 1..1849
/db_xref="H-InvDB:HIT000052386"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48915 IMAGE:5227612"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1849
/gene="C1QTNF9"
/gene_synonym="MGC48915"
/db_xref="GeneID:338872"
/db_xref="HGNC:HGNC:28732"
CDS 62..1063
/gene="C1QTNF9"
/gene_synonym="MGC48915"
/codon_start=1
/product="C1q and tumor necrosis factor related protein 9"
/protein_id="AAH40438.1"
/db_xref="GeneID:338872"
/db_xref="HGNC:HGNC:28732"
/translation="MRIWWLLLAIEICTGNINSQDTCRQGHPGIPGNPGHNGLPGRDG
RDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGP
KGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKP
GPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSD
VPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHT
KDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLFSSP"
BASE COUNT 524 a 379 c 469 g 477 t
ORIGIN
1 gcacagtatc tgggtccagc ctgcagccct agggtccagt tcagagtctg tcatctgaac
61 catgaggatc tggtggcttc tgcttgccat tgaaatctgc acagggaaca taaactcaca
121 ggacacctgc aggcaagggc accctggaat ccctgggaac cccggtcaca atggtctgcc
181 tggaagagat ggacgagacg gagcgaaggg tgacaaaggc gatgcaggag aaccaggacg
241 tcctggcagc ccggggaagg atgggacgag tggagagaag ggagaacgag gagcagatgg
301 aaaagttgaa gcaaaaggca tcaaaggtga tcaaggctca agaggatccc caggaaaaca
361 tggccccaag gggcttgcag ggcccatggg agagaaaggc ctccgaggag agactgggcc
421 tcaggggcag aaggggaata agggtgacgt gggtcccact ggtcctgagg ggccaagggg
481 caacattggg cctttgggcc caactggttt accgggcccc atgggcccta ttggaaagcc
541 tggtcccaag ggagaagctg gacccacggg gccccagggt gagccaggag tccggggaat
601 aagaggctgg aaaggagatc gaggagagaa agggaaaatc ggtgagactc tagtcttgcc
661 aaaaagtgct ttcactgtgg ggctcacggt gctgagcaag tttccttctt cagatgtgcc
721 cattaaattt gataagatcc tgtataacga attcaaccat tatgatacag cagcggggaa
781 attcacgtgc cacattgctg gggtctatta cttcacctac cacatcactg ttttctccag
841 gaatgttcag gtgtctttgg tcaaaaatgg agtaaaaata ctgcacacca aagatgctta
901 catgagctct gaggaccagg cctctggcgg cattgtcctg cagctgaagc tcggggatga
961 ggtgtggctg caggtgacag gaggagagag gttcaatggc ttgtttgctg atgaggacga
1021 tgacacaact ttcacagggt tccttctgtt cagcagcccg tgacagagga gagtttaaaa
1081 atccgccaca ccatccatca gaatcagctt gggatgaact tattcagatg gttttacttt
1141 attaattcct ccaattatta caataatcat aaaaaggtga aaatggaaaa gttattccca
1201 aaactgattc tgtgtaactt actatttttc caggagtaaa tatttaaaat agctgcatgg
1261 tttattctaa tttatttcac atttcttatt cctattatct gaagaatccc tcgtctgtgc
1321 gtttcttgtg ggaagagtgt tttaatatca ttttagtgct ctgaggagtc atatgaagat
1381 gtatccctca tctgtgtttc tgaggacatt aaggggaaat tagagggaaa tgtttattca
1441 atttagtact agcaacagct ttaagctggt gatgctgtca tactccagaa agctgtagac
1501 actgctcatt ttgtctttta aaaaaatttt attttatttt aagttctggg atacatatgc
1561 aaaacatgca tgtttgttac ataggtaaac atgtgctgtg gtggtttgct gtatctatca
1621 acccatcacc taggtattaa gccctgcatg cattagctat ttgtcctggt gctctccctc
1681 ccactttgct cattttctaa cctaggtttt aatcaccatt ttacccaaca aatcattgtt
1741 cgatcattat ttgccagact tgaatctcta tgtgttttct aggactgctc taataaagta
1801 cacaaactgg gagtctttaa acaacaaaaa aaaaaaaaaa aaaaaaaaa
//