LOCUS BC040437 1633 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens integral membrane protein 2A, mRNA (cDNA clone
MGC:48842 IMAGE:5748519), complete cds.
ACCESSION BC040437
VERSION BC040437.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1633)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1633)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33589836.
FEATURES Location/Qualifiers
source 1..1633
/db_xref="H-InvDB:HIT000052385"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48842 IMAGE:5748519"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1633
/gene="ITM2A"
/gene_synonym="BRICD2A"
/gene_synonym="E25A"
/db_xref="GeneID:9452"
/db_xref="HGNC:HGNC:6173"
/db_xref="MIM:300222"
CDS 93..884
/gene="ITM2A"
/gene_synonym="BRICD2A"
/gene_synonym="E25A"
/codon_start=1
/product="integral membrane protein 2A"
/protein_id="AAH40437.1"
/db_xref="GeneID:9452"
/db_xref="HGNC:HGNC:6173"
/db_xref="MIM:300222"
/translation="MVKIAFNTPTAVQKEEARQDVEALLSRTVRTQILTGKELRVATQ
EKEGSSGRCMLTLLGLSFILAGLIVGGACIYKYFMPKSTIYRGEMCFFDSEDPANSLR
GGEPNFLPVTEEADIREDDNIAIIDVPVPSFSDSDPAAIIHDFEKGMTAYLDLLLGNC
YLMPLNTSIVMPPKNLVELFGKLASGRYLPQTYVVREDLVAVEEIRDVSNLGIFIYQL
CNNRKSFRLRRRDLLLGFNKRAIDKCWKIRHFPNEFIVETKICQE"
BASE COUNT 470 a 314 c 323 g 526 t
ORIGIN
1 gtgctgtttg ggctaacagg atctcctctt gcagtctgca gcccaggacg ctgattccag
61 cagcgcctta ccgcgcagcc cgaagattca ctatggtgaa aatcgccttc aataccccta
121 ccgccgtgca aaaggaggag gcgcggcaag acgtggaggc cctcctgagc cgcacggtca
181 gaactcagat actgaccggc aaggagctcc gagttgccac ccaggaaaaa gagggctcct
241 ctgggagatg tatgcttact ctcttaggcc tttcattcat cttggcagga cttattgttg
301 gtggagcctg catttacaag tacttcatgc ccaagagcac catttaccgt ggagagatgt
361 gcttttttga ttctgaggat cctgcaaatt cccttcgtgg aggagagcct aacttcctgc
421 ctgtgactga ggaggctgac attcgtgagg atgacaacat tgcaatcatt gatgtgcctg
481 tccccagttt ctctgatagt gaccctgcag caattattca tgactttgaa aagggaatga
541 ctgcttacct ggacttgttg ctggggaact gctatctgat gcccctcaat acttctattg
601 ttatgcctcc aaaaaatctg gtagagctct ttggcaaact ggcgagtggc agatatctgc
661 ctcaaactta tgtggttcga gaagacctag ttgctgtgga ggaaattcgt gatgttagta
721 accttggcat ctttatttac caactttgca ataacagaaa gtccttccgc cttcgtcgca
781 gagacctctt gctgggtttc aacaaacgtg ccattgataa atgctggaag attagacact
841 tccccaacga atttattgtt gagaccaaga tctgtcaaga gtaagaggca acagatagag
901 tgtccttggt aataagaagt cagagattta caatatgact ttaacattaa ggtttatggg
961 atactcaaga tatttactca tgcatttact ctattgctta tgctttaaaa aaaggaaaaa
1021 aaaaaaaact actaaccact gcaagctctt gtcaaatttt agtttaattg gcattgcttg
1081 ttttttgaaa ctgaaattac ctgagtttca ttttttcttt gaatttatag ggtttagatt
1141 tctgaaagca gcatgaatat atcacctaac atcctgacaa taaattccat ccgttgtttt
1201 ttttgtttgt ttgttttttc ttttccttta agtaagctct ttattcatct tatggtgcag
1261 caattttaaa atttgaaata ttttaaattg tttttgaact ttttgtgtaa aatatatcag
1321 atctcaacat tgttggtttc ttttgttttt cattttgtac aactttcttg aatttagaaa
1381 ttacatcttt gcagttctgt taggtgctct gtaattaacc tgacttatat gtgaacaatt
1441 ttcatgagac agtcattttt aactaatgca gtgattcttt ctcactacta tctgtattgt
1501 ggaatgcaca aaattgtgta ggtgctgaat gctgtaagga gtttaggttg tatgaattct
1561 acaaccctat aataaatttt actctataca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaa
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