LOCUS BC040436 2351 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA
clone MGC:48837 IMAGE:5518580), complete cds.
ACCESSION BC040436
VERSION BC040436.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2351)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2351)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23111060.
FEATURES Location/Qualifiers
source 1..2351
/db_xref="H-InvDB:HIT000052384"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48837 IMAGE:5518580"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2351
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/db_xref="GeneID:9295"
/db_xref="HGNC:HGNC:10782"
/db_xref="MIM:602010"
CDS 80..1531
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/codon_start=1
/product="splicing factor, arginine/serine-rich 11"
/protein_id="AAH40436.1"
/db_xref="GeneID:9295"
/db_xref="HGNC:HGNC:10782"
/db_xref="MIM:602010"
/translation="MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSA
SSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVD
RALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGA
PTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKE
IEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRR
SHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTAR
RSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERE
RSTSKKKKSKDKEKDRERKSESDKDVKVTRDYDEEEQGYDSEKEKKEEKKPIETGSPK
TKECSVEKGTGDSLRESKVNGDDHHEEDMDMSD"
BASE COUNT 751 a 457 c 545 g 598 t
ORIGIN
1 agagaagcct tttccgttgc cggtgccggc ctagcgtcct ggaattactt caatcaagag
61 cgagaacccg agcagcgcca tgagcaacac taccgtcgtc cccagcactg caggtccggg
121 ccccagcggc gggcccggtg gcggaggtgg tggtggcggc ggaggcggcg gcaccgaggt
181 aatccaggtg actaatgtct ccccgagcgc tagctctgag cagatgcgga ctctcttcgg
241 tttcctaggc aagatcgacg aactgcgcct cttcccgccg gatgattcgc ctttgccagt
301 ctcatctcgt gtctgctttg ttaagttcca tgatccagac tcagcagttg tggcacagca
361 tctgacaaac actgtattcg ttgacagagc tttgatagtc gtaccatatg cagaaggagt
421 tattcctgat gaagctaaag ctttgtctct gttggcacca gctaatgcag tggcaggtct
481 tctgcctggt ggtggactcc tgcctactcc taacccactt acccagattg gcgctgttcc
541 actggctgct ttgggggctc ctactcttga tcctgccctt gctgcacttg ggcttcctgg
601 agcaaacttg aactctcagt ctcttgctgc agatcagttg ctgaagctta tgagtactgt
661 tgatcccaag ttgaatcatg tagctgctgg tctcgtttca ccaagtctga aatcggatac
721 ctctagtaaa gaaatagagg aagctatgaa aagagtacga gaagcacagt ccctaatttc
781 tgctgctata gaaccagata agaaagaaga aaaaagaagg cattcaagat caagatcacg
841 ttctaggagg aggaggactc cctcatcttc tagacacagg cggtcaagaa gcagatcgag
901 acggcggtca cattctaagt ctaggagtcg gcgacgatcc aaaagcccaa ggcggagaag
961 atctcattcc agagaaagag gtagaaggtc aaggagcaca tcaaaaacaa gagacaaaaa
1021 gaaagaagac aaagaaaaga aacgttctaa aacaccacca aaaagttaca gcacagccag
1081 acgttctaga agtgcaagca gagagagacg acgacgaaga agcaggagtg gcacaagatc
1141 tcctaaaaag cctcggtctc ctaaaagaaa attgtcccgc tcaccatccc ctaggagaca
1201 taaaaaggag aagaagaaag ataaagacaa agaaagaagt agggatgaaa gagaacgatc
1261 aacaagcaag aagaagaaga gtaaagataa ggaaaaggac cgggaaagaa aatcagagag
1321 tgataaagat gtaaaagtta cacgggatta tgatgaagag gaacaggggt atgacagtga
1381 gaaagagaaa aaagaagaga agaaaccaat agaaacaggt tcccctaaaa caaaggaatg
1441 ttctgtggaa aagggaactg gtgattcact aagagaatcc aaagtgaatg gggatgatca
1501 tcatgaagaa gacatggata tgagtgactg aatattgcct ctgagggagt ccaactgtat
1561 acctgcatca gtgtcattcc tttgtgtgat ttcttaatgc tgtatttgtt catctcaaac
1621 ctagatgtat acagctctga gttataaatg gttataaagc tcctgttact catattagtt
1681 atttacatca aaaagctttt agaaaatggt acgaggtaac caattcttgt catggtgaaa
1741 tctgattgag taaccaagca gttttactat tctggtgctg cttcataaca aaaatgaaaa
1801 gctgcatgca tctacagcag gcatggattg tttatgtcgt atgatatcct ttattaagta
1861 agttcactta tagtatttct ataatttgat tcattgccgt aatagagcca tgtaggaaat
1921 gcactgattg catgttattg tggcaagaat atcctaaatg tcattaaaat cctccaacat
1981 gatggatcta cttatggtct tgtttgttga catgacaaat taacattctt atagttacat
2041 ctggaaatga gcatttgaaa tagataatcc tttaagcctt gtggcaaaat ttttgtggct
2101 tttgtttaac tttgaaaggt tattatgcac taaccttttt tggtggctaa ttagggttta
2161 aatacagaaa caagatttca aataaaactg tctttggcag tgagtaaata gcatattttg
2221 aagtagagtt gtatactttt tcataagatg tttgggaatt tttttcctga agtaataatt
2281 tattccacat ctacatcagt gaaagctatc tacctatcct gagtctatct taaaggaaaa
2341 aaaaaaaaaa a
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