LOCUS BC040291 4689 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens family with sequence similarity 116, member A, mRNA (cDNA clone MGC:42456 IMAGE:4822560), complete cds. ACCESSION BC040291 VERSION BC040291.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4689) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4689) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 71 Row: f Column: 4. FEATURES Location/Qualifiers source 1..4689 /db_xref="H-InvDB:HIT000052366" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:42456 IMAGE:4822560" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4689 /gene="FAM116A" /gene_synonym="FLJ34969" /db_xref="GeneID:201627" /db_xref="HGNC:HGNC:26635" CDS 60..1886 /gene="FAM116A" /gene_synonym="FLJ34969" /codon_start=1 /product="family with sequence similarity 116, member A" /protein_id="AAH40291.1" /db_xref="GeneID:201627" /db_xref="HGNC:HGNC:26635" /translation="MALRGPAGLGPGSRRPLDEAVAGAEGREAPALVAAGGAPEDDEE DDGRGRGLLRWDSFSAWLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFP DSNSGCLGDTQFCFRFRQSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVR DKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPV PGKTLHLPIMGVVMKVRIPTCHDKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFC PVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFTIHDS EFKEYTTRTQAPPSVILGVTNPFFAKTLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNL KTLDSKPGVYTSYKPYLNRDEEIIKQLQKGVQQKRPSEAQSVILRRYFLELTQSFIIP LERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEKTGPQLTSRIKGDWIGLYRHF LKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLL QADREHLPVKPDTMEKLRTHIDAIILALPEDLQGILLKTGMT" BASE COUNT 1339 a 881 c 1019 g 1450 t ORIGIN 1 aagcgcgctc tgcggcgcgg tccgctgtgg aggcggcgcg aacggtcagg gggcggccga 61 tggctttgag gggccctgcg ggcttggggc ccggctctcg aaggccgttg gacgaagcgg 121 tggcaggggc cgagggccgc gaggcgccgg cccttgtggc ggcgggaggc gcgccagagg 181 acgatgaaga ggacgatggc cgtggccggg gcctgctgcg ctgggacagc ttctccgcct 241 ggctgcactg cgtgtgtgtg gtgggcttcg acctggagct gggccaggcc gtggaggtaa 301 tttatcctca gcattccaaa cttactgaca gagaaaaaac caatatttgc tatttgtctt 361 ttccagattc aaattcaggt tgtcttggag atacccagtt ttgttttaga tttcgacagt 421 cttctgggag gagggtgtcg ctgcattgtc tcctggatca atttgacaaa gatttaccag 481 tttacttaaa gaaggatcct gcttattttt atggatatgt gtatttccga caagttcgag 541 ataaaactct aaaaagaggc tactttcaga agtccttggt tttgatcagc aaactacctt 601 atattcattt ttttcacact gtgctcaaac agatagcacc agagtatttt gaaaagaatg 661 aaccttattt ggaagcagct tgtaatgatg ttgatcgatg gcctgcccca gtgccaggga 721 aaacattaca cctgccaatc atgggggtgg taatgaaggt acggattccc acatgtcatg 781 acaagcctgg gacaactcaa atagtgcagt taactcagca ggtggacaca aatatatctg 841 ttattttacc tactgttcat gaggtggata ttttcaggtg tttctgccca gttttccttc 901 atagtcagat gctctgggag ctggtgctgt tgggggagcc ccttgtggtt atggcgccat 961 caccatcgga atcatcagag actgtattgg cacttgttaa ctgtatttct ccattaaagt 1021 acttcagtga tttccgacct tatttcacta ttcatgatag tgaattcaaa gaatatacta 1081 cccgtacgca agctccgccc tcagttatat taggagtaac caaccctttt tttgctaaga 1141 cactccagca ctggccacac attattcgaa taggagacct taaacctaca ggtgaaattc 1201 ctaagcaggt taaagtgaaa aaactgaaga atctaaagac tctggattcc aaacctggag 1261 tttatacttc atataagcca tatttaaata gagatgaaga gatcataaaa caattacaga 1321 agggtgtaca acagaaacgt ccttctgagg ctcaaagtgt tattcttcga cgctattttt 1381 tggaactgac acaaagtttc atcattccat tagaaagata tgtggcaagc ttgatgcctt 1441 tgcagaaaag tatttcccca tggaagagtc cacctcaatt aagacagttt cttccagaag 1501 aatttatgaa aacacttgag aaaacaggac ctcagctaac ctctagaata aaaggcgatt 1561 ggattggact ttaccggcat ttcctaaagt ctccaaattt tgatggctgg tttaagaccc 1621 ggaggaagga aatgacccaa aaattggagg cactccatct agaagctctt tgtgaagagg 1681 acttacttct ctggatccag aaacacacag aagtagaaac agtagacctt gtcttgaagc 1741 tgaaaaataa gctgttgcag gctgatcgag agcacttacc tgtgaaacct gacactatgg 1801 aaaagttacg gacacacata gatgccatta tcttagcatt gccagaggac ttgcaaggca 1861 tactgctcaa aacgggcatg acatgatatt tgccaagatt ttccagccaa aaaggattat 1921 gcatcatgaa gcatactgac atttcaacca gacgcacaaa ggagatctct cagtggcagc 1981 ggagtggaaa attgccatga atgctagtta cagggtagaa agactgtatt gtataaacag 2041 acctttttag tgcattactt tttaaagtgg atatctgtgg tggttccact ttaatactga 2101 aacaccgaaa ggcatttcta tatttttaat catgttctaa agtgctctta tgagagactt 2161 gtgggccatc agtattagtg atttcatact gcagtgctgg cattgcagat atttttttaa 2221 attggtgctg ctttgcccaa tcatgttaaa actcaggggg atataaaaat aacattcaca 2281 ctggctatct tcttaagaac agaaagactg aactgtccta tggttagaag gaattgatgc 2341 ttatgtagtg ccttctgttg tcctacatgt ttcacagttc agctgctagt cttgaagctt 2401 ttccttagct tcattatgat acgtaatttt ataaggtatt ctgttgagtg atcattgttt 2461 aaaaaaaaag tttcttgcta cccattgtgt ttattaatag acatgatggg ttttttttca 2521 gttgtcatat agattttcat tattttccct tccattttca aaatttaatg ttaccagttt 2581 ctccaaagac aagaaggcat ctagtattaa tgatggaaga gtttattttc tcttaccctt 2641 tactaattta aacattaggc tgggtgtggt ggctcacgcc tgtaatccta gcactttggg 2701 aggccgaggt ggacgggtca cttaaggtcg agagtccaag accagcctgg ccaacatggt 2761 gaaaccccgt ctctggtaga aatgcaaaaa ttggccaggc atggtggcac gcgcctgtaa 2821 tcccagctac ttgggaggct gggatgtgag aatcacttga acctgggagg cggaggttgc 2881 agtgagctga gattgcaccc ctggactcca gcttgggtga cacagtgaga ctgtgtctca 2941 acaaaaataa aaaattaaat aaatactaat ttaaatatta ttaaatgttt aaactaatga 3001 acttggctgc ttttcaaaga cattttaatt ataaatctca taatcagcta tttttttaaa 3061 ctgaactatt cttatttcaa aggcattcat gagtttttta tgtgatactt atttgagtga 3121 tgataagatt gatttctggc attatttgtt tggtagcgtt ttatttttcc caacattaat 3181 gtttcttaaa acacttttcc tactattgtt tgacatggga actttcgcct gagtcactgt 3241 catggttagc ttttgttgtt gttgtttttg tttctgtttt gtttaaacaa tactaccttg 3301 ccaaaaatag aagaatgtga tttggtagag tagggttgtt tggtttgtgt ttgaataaga 3361 gtatcctaca gaagccactt tttttttttt tgagatggag ttttgctctt gttgcccagg 3421 ctggagtgca atggcgcaat ctcggctgac tgcaacctcc acctcccggg tgcaagtgat 3481 tgtcctgcct cagcctcctg agtagctggg attacaggta tgtgccatca cgcctggcta 3541 attttgtatt tttggtagag atggggtttc tccatgttgg tcaggctggt ctcaaactcc 3601 cgacctcggg tgatccgccc gcctcggcct cccagggtgc tgggattgca ggtgtgagcc 3661 accgcacctg gccagaagcc actaactaaa ataggcacac atgacacagc atgtggttaa 3721 tagctgtgtc ttgaattatc ctctaaataa ccaaatttag ttgtatgtat ttgtaaagga 3781 tatggcttca gaagctatct tttgttctct gtcgatataa ctcttaaggg cattcctgac 3841 ccaagaaaga ctccttgcgt ttgtaactgt ggtctaatac ccaaatgtgc cctgttctta 3901 tggatacagt ctcttgaagc atacctcaaa gtcatagaga gaatatggca tttgaaagaa 3961 atcgtttgcc ttggatcata tgagttattt tgtgaaacaa cagctgactt ttcagaaaag 4021 gagcaactac ttttatatgc taaaagtatt tcataacttt ctgggaaacc ttatttaggt 4081 ataaatggtc atcttattat ttttcaaaaa ggtatatttt aataattgta caatttatat 4141 acagtttgtg accagaattt gtaagttgtt ggtgtcatat caaggatctt ttaaattatg 4201 ccactacagg atgtatcatt tcaagtctat tttgcacagc taaacagtag caaaagatgc 4261 caattagcat gataatggtg tcttcatttt tactgtattt aactgaaacc taacacatgt 4321 tgaaaaccat atcataccta gtttatctct taatttcaaa ctatgtactt gtaaaaatga 4381 tgtaaatttg cactgggaac ctgggaaaga gtgactgata atttttggtg cgtgattttt 4441 agatttgtct ttttttttta agaagaattt gttactatgt aaaccctgac attaaatgtt 4501 ttatctctac cagcatcagg aggaatcact gctttaaggg tattatgtaa tgcctagtgc 4561 cttctattta cagtgaaaaa gaggttttgc gaaggcattt atggtcatta ccaaaaacta 4621 aattaaaggc cttggatttt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aagaaaaaaa 4681 aaaaaaaaa //