LOCUS BC040279 2061 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lactate dehydrogenase D, mRNA (cDNA clone MGC:34649
IMAGE:5162826), complete cds.
ACCESSION BC040279
VERSION BC040279.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2061)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2061)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37595755.
FEATURES Location/Qualifiers
source 1..2061
/db_xref="H-InvDB:HIT000096095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34649 IMAGE:5162826"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2061
/gene="LDHD"
/gene_synonym="MGC57726"
/db_xref="GeneID:197257"
/db_xref="HGNC:HGNC:19708"
/db_xref="MIM:607490"
CDS 18..1541
/gene="LDHD"
/gene_synonym="MGC57726"
/codon_start=1
/product="lactate dehydrogenase D"
/protein_id="AAH40279.1"
/db_xref="GeneID:197257"
/db_xref="HGNC:HGNC:19708"
/db_xref="MIM:607490"
/translation="MARLLRSATWELFPWRGYCSQKAKGELCRDFVEALKAVVGGSHV
STAAVVREQHGRDESVHRCEPPDAVVWPQNVEQVSRLAALCYRQGVPIIPFGTGTGLE
GGVCAVQGGVCVNLTHMDRILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGA
DASLCGMAATGASGTNAVRYGTMRDNVLNLEVVLPDGRLLHTAGRGRHFRFGFWPEIP
HHTAWYSPCVSLGRRKSAAGYNLTGLFVGSEGTLGLITATTLRLHPAPEATVAATCAF
PSVQAAVDSTVHILQAAVPVARIEFLDEVMMDACNRYSKLNCLVAPTLFLEFHGSQQA
LEEQLQRTEEIVQQNGASDFSWAKEAEERSRLWTARHNAWYAALATRPGCKGYSTDVC
VPISRLPEIVVQTKEDLNASGLTGSIVGHVGDGNFHCILLVNPDDAEELGRVKAFAEQ
LGRRALALHGTCTGEHGIGMGKRQLLQEEVGAVGVETMRQLKAVLDPQGLMNPGKVL"
BASE COUNT 402 a 639 c 646 g 374 t
ORIGIN
1 ctggccagtg cctggctatg gcccgactgc tcaggtctgc aacctgggag ctgttcccct
61 ggaggggcta ctgctcccag aaggcaaagg gagagctctg cagggacttc gtagaggctc
121 tgaaggccgt ggtgggcggc tcccacgtgt ccactgccgc ggtggtccga gagcagcacg
181 ggcgcgatga gtcggtgcac aggtgcgaac ctcctgatgc tgtggtgtgg ccccagaacg
241 tggagcaggt cagccggctg gcagccctgt gctatcgcca aggtgtgccc atcatcccat
301 tcggcaccgg caccgggctt gagggtggcg tctgtgctgt gcagggcggc gtctgcgtta
361 acctgacgca tatggaccga atcctggagc tgaaccagga ggacttctct gtggtggtgg
421 agccaggtgt cacccgcaaa gccctcaacg cccacctgcg ggacagcggc ctctggtttc
481 ccgtggaccc aggcgcggac gcctctctct gtggcatggc ggccaccggg gcgtcgggga
541 ccaacgcggt ccgctacggc accatgcggg acaacgtgct caacctggag gtggtgctgc
601 ccgacgggcg gctgctgcac acggcgggcc gaggccggca tttccgcttc ggcttctggc
661 cagaaatccc tcatcacaca gcctggtact caccttgtgt gtccctggga cgtaggaaga
721 gtgcagccgg ctacaacctc acggggctct tcgtgggctc cgaggggacg ctgggcctca
781 tcacagccac caccctgcgc ctgcaccctg cccctgaggc cacagtggcc gccacgtgtg
841 cgttccccag tgtccaggct gctgtggaca gcactgtaca catcctccag gctgcagtgc
901 ccgtagcccg cattgagttc ctggatgaag tcatgatgga tgcctgcaac aggtacagca
961 agctgaattg cttagtggcg cccacactct tcctggagtt ccatggctcc cagcaggcac
1021 tggaggagca gctgcagcgc acagaggaga tagtccagca gaacggagcc tctgacttct
1081 cctgggccaa ggaggccgag gagcgcagcc ggctttggac agcacggcac aatgcctggt
1141 acgcagccct ggccacgcgg ccaggctgca agggctactc cacggatgtg tgtgtgccca
1201 tctcccggct gccggagatc gtggtgcaga ccaaggagga tctgaatgcc tcaggactca
1261 caggaagcat tgtcgggcat gtgggtgacg gcaacttcca ctgcatcctg ctggtcaacc
1321 ctgatgacgc cgaggaactg ggcagggtca aggcttttgc agaacagctg ggcaggcggg
1381 cactggctct ccacggaacg tgcacggggg agcatggcat cggaatgggc aagcggcagc
1441 tgctgcagga ggaggtgggc gccgtgggcg tggagaccat gcggcagctc aaggccgtgc
1501 tagaccccca aggcctcatg aatccaggca aagtgctgtg aagggggtct gagcacttag
1561 cccacaagtt ccctgactac ggagccggtt ctggaacttt tcttcatgcc acggcccctg
1621 caaggaaata gatgctgagg cagtcttcct gccagcgagc ccactgtatc tgggcccaag
1681 gccagagggc ccagagagaa gcctgagcac cgtgttacct ccctggccct ctggctggcc
1741 ccaggagcct ttggttcagt aaacgaccca gggtggttcc cagcaaagct gcttcctctc
1801 tgctcctacg catcctgtcc tggcgggaag agagcgtctg ggtccattca agactctgat
1861 gacacccctc cccgaggcct cccactgccg gggtcccagg acccttcccc cttcacctgg
1921 tgacaggaac actcctttcc tggtatggaa cgtgagctcc cgtgacatga tgataggtct
1981 tctccttggg gcctccccca ataaatctgt aataaacctg aaacccacct acagctaaaa
2041 aaaaaaaaaa aaaaaaaaaa a
//