LOCUS BC040237 2547 bp mRNA linear HUM 27-OCT-2008
DEFINITION Homo sapiens small nucleolar RNA host gene 11 (non-protein coding),
mRNA (cDNA clone IMAGE:4818983).
ACCESSION BC040237
VERSION BC040237.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2547)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2547)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982870.
FEATURES Location/Qualifiers
source 1..2547
/db_xref="H-InvDB:HIT000052351"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4818983"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 484 a 711 c 687 g 665 t
ORIGIN
1 gagggagcgt cttgtggctg cggcctgccc ctcagcctcc tccgcgcggt tacccctgta
61 cccgccgcca tccgtcctgg cgctccggat gagtcaatga ggggcagggc ccgaggagtg
121 gtcttcccaa gaacccctgg tggcctccca aggccggtgc tgtgtacctc ctccacgaca
181 aaaggggaaa ctgaggcccc gaggggagtg ggaagagccg gctggacgtc aggcccagcc
241 gctggtgcag tggtccgtcc cctctgccgg ggtgggcccc tcgggtttcg cgtgtcctcg
301 ggaaagagac tggcgggtga gccgcgccct cggccttcgc tgggctaagc cgaccccatg
361 cagacgtcaa acccccctag gtcggcacag cctctctgcg gggaggctta gtgccccctt
421 gagaaacggc ttggcaacgc tgtgcccggg gccttgcacg cgggctgagg ggggctagag
481 acctcgcgac ttttactccc ccgaccccga tctccgactc ctgactttgg aagcccccaa
541 agctgctttt cggttgccta caaagtgtcg gtcattgtgc cacgtccttg gaaccgtgaa
601 ctcattttct cctcaataac ctttaaaaag tagctgtaaa acctccattt tacagaccag
661 ttggctgagg tttaaatgga ggacgctccc agggccccag aggggcgaat tccagactcc
721 tttgccagga ccttgtacta agccccttcc atacgctttt ccctgcctag gcctcgtggg
781 ctgtgcggct atcctggaga cagatgacag ctctcccttg gatggctttg ctggttccgc
841 accagccagc gcccccattt ttcctgcagc accctgatct gcactccctg aggggctccc
901 actgtccgcg gtgtgaggat gtccctgggt aagtggtgct ggtcatgagc actttggggg
961 acccttcaaa ttcccttctg ggggacccca gcggagggca tggtcatgaa ttcagagaac
1021 tgtatggcaa agccgggtgc agaggagagc ctggctaagt tctttcattc tcctgagctt
1081 gactttctgt aatgtaggga aactgcgaaa gctctgtaag tggggagatc ttgcacgttt
1141 ttcttgcttt tgaacccatg atgtctggct acttgtagat actcaatatt tgtgggatga
1201 atgaacaatt taagcctttt tttttttaac cagaaattgg tcttctgtga ctttcttgat
1261 gggggcagat gagatctttg tactgcatta agtggatagc gctcaggtcc tttgggcttg
1321 gcgctttggc aatctccagg cagctcactt tggcctctgt tcctggatcc cctttgctct
1381 tttctgcgcc tgcattcgta agtgatcacg ggctgcccgt gtcctggtca ttggtagtgc
1441 aggcagagga aatgcgggaa aggttgctgt gtttggaggg tccacatctt caccctcctg
1501 tccaaggagc tttcctacac tcctccttct caaagctgca cacacctggg gcctccaggg
1561 gattgggggc tgccgtgtgt gttatatcat gattagagct ttcacttcct gctccctgct
1621 gttgggaacc aggctgtgtg tgttgcttaa attccccttg atgaccagca gagtcactgc
1681 cactcagcca tggcacactg ctgtaaacct ggttttgatc tcctttcaat cttttgctga
1741 ttaactacac attgatcagt gttggccacc ctcaccctgc catagaccat ccgctgtctt
1801 cctctgtaga gttaactatt ttctctttta tgaggaaata gtgtgtttgc ttaggagtgt
1861 ttactgtctg gtaactactg tgctaagccc tttcctgttg cctgccatcc ctgctgcgag
1921 cagggacaag ctgggtgctc actcatggca tcttatctgt tgcagatagt ccactgtgtg
1981 cagaggcatg ggagttgtca tgttgggaac atgctagacc tcagtatcct tgagggatgc
2041 tgccttgggt ctggaaactg ttagaggaaa ccccaagagg tgcaggcact gagcctctca
2101 ggacaatgac ctggggtccc agctcccctg gaggggcctc ctcatgattg tttgggggtt
2161 gatcacagac caagagtgac gagtgatgtc accctgtgac tcatggccgg accttcttgc
2221 ccctattgtc tcagcacaac attattcgac ttttccctca gcgtgggtgg gcagaggaaa
2281 agccctgtgg ctctggggac ttgggatcca gagttgaaga cccttcagct ggctctgccc
2341 tgccagtgcc acagagtgcc atggcccagg aagacaggtt ttcttccatc taggccaggc
2401 catccagtgg ccatcctccg tgtcctcccg cctcctcctg gtgtgacttc tgaaaaccaa
2461 gaatttgttc ctgttgactt tttctgtgct atggaccatt gtcctctcac ccactcaata
2521 aatcttgaaa caaaaaaaaa aaaaaaa
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