LOCUS BC040228 4317 bp mRNA linear HUM 06-OCT-2003 DEFINITION Homo sapiens protein kinase C and casein kinase substrate in neurons 1, mRNA (cDNA clone MGC:34644 IMAGE:5173129), complete cds. ACCESSION BC040228 VERSION BC040228.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4317) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4317) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: j Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24308228. FEATURES Location/Qualifiers source 1..4317 /db_xref="H-InvDB:HIT000052348" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34644 IMAGE:5173129" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4317 /gene="PACSIN1" /gene_synonym="KIAA1379" /db_xref="GeneID:29993" /db_xref="MIM:606512" CDS 246..1580 /gene="PACSIN1" /gene_synonym="KIAA1379" /codon_start=1 /product="PACSIN1 protein" /protein_id="AAH40228.1" /db_xref="GeneID:29993" /db_xref="MIM:606512" /translation="MSSSYDEASLAPEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMN CVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSLERAWGAIMTEADKVSELHQEVK NNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAY HLACKEEKLAMTREMNSKTEQSVTPEQQKKLQDKVDKCKQDVQKTQEKYEKVLEDVGK TTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIR GADAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTTTKKEKQPKKAEGVALTNATGA VESTSQAGDRGSVSSYDRGQPYATEWSDDESGNPFGGSETNGGANPFEDDSKGVRVRA LYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI" misc_feature 294..560 /gene="PACSIN1" /gene_synonym="KIAA1379" /note="FCH; Region: Fes/CIP4 homology domain" /db_xref="CDD:smart00055" misc_feature 1401..1577 /gene="PACSIN1" /gene_synonym="KIAA1379" /note="SH3; Region: Src homology 3 domains" /db_xref="CDD:smart00326" BASE COUNT 958 a 1353 c 1220 g 786 t ORIGIN 1 gccttcctga gtgagcggtg gagggaaccc tagaggacag agcccccagc ccggcagcag 61 gccccctctc cgcccgccac cacggaggag aaggaggaca gccagcccct ccagccctgg 121 cctggcccag cgggggcagt aagctcctac ttgcccccag cttggtgccc acacgggccc 181 agtgcatgag cagccgagcc tgctaaccgc agctccgcac ttgtccatcc ccctgcggct 241 acaccatgtc cagctcctac gatgaggcct cactggcgcc agaggagacc accgacagct 301 tctgggaggt ggggaactac aagcggaccg tgaagcgcat cgatgacggc caccgtctat 361 gcaacgacct gatgaactgc gtgcaggagc gcgccaagat cgagaaggcg tacgggcagc 421 agctcaccga ctgggccaag cgttggcgcc agctcatcga gaaaggccca cagtatggca 481 gcctggagcg ggcctggggt gccataatga cagaggcaga caaggtgagc gagctgcacc 541 aggaggtgaa gaacaatctg ctgaatgagg acctggagaa ggtgaagaac tggcagaagg 601 acgcctatca caagcagatc atgggtggct tcaaggagac gaaggaggct gaagatggct 661 tccgcaaggc ccagaagcct tgggccaaga agatgaagga gctggaggca gccaagaagg 721 cctaccattt ggcttgcaaa gaggaaaagc tggccatgac acgggagatg aacagcaaga 781 cggagcaatc ggtcacacct gagcagcaaa agaagctgca ggacaaagtg gacaagtgca 841 agcaggatgt gcagaagaca caggagaagt atgagaaagt gctggaagat gtgggcaaga 901 ccacacccca gtacatggag aacatggagc aggtgtttga gcaatgccag caatttgagg 961 aaaagcggct ggtcttcctc aaggaggtgc tgctggacat caaacggcac ctcaacctgg 1021 ctgagaacag cagctacatc catgtgtacc gtgagctgga gcaggccatc cggggggctg 1081 atgcccagga agacctcaga tggttccgca gcaccagtgg ccccggcatg cccatgaact 1141 ggccccagtt tgaggagtgg aacccagacc ttcctcacac caccaccaag aaggagaaac 1201 agcctaagaa ggcagaggga gtggcgctga ccaatgccac tggggcggta gagtccacat 1261 cccaggctgg ggaccgcggc agtgttagca gctacgacag aggccagccc tacgccaccg 1321 agtggtcaga cgacgagagt gggaacccct ttgggggcag tgagaccaac gggggcgcca 1381 acccctttga ggacgactcc aagggagtgc gcgtgcgggc actctacgac tatgacggcc 1441 aggagcagga cgagctcagc tttaaggccg gagacgaact caccaagctg ggcgaggagg 1501 atgagcaggg ctggtgccgt gggcggctgg acagcgggca gctgggcctc taccctgcca 1561 actacgtgga ggctatctag aggccccctc cctccatact cccgtcactc ctccccactg 1621 ccgcccctcc cctcccactc tcgtctcctt cccctcgcca tagagttcca gacatatttt 1681 ccgatcaagc ttttattttt ttaaaagtca aaacagaaca aaacaaagta tgcagagaca 1741 gagcatttgc agggccacct ggaggctggg gtgctggggc ttggggtggc cccagggtag 1801 gtaacagtct taggacttag cccaacatca caacatctgc tcttcgggtt ccaccaaaga 1861 gtctcctgag ccctgaggga tggatgtctc ctgacccttc caccccgcct cactccctcc 1921 gtcccactcc actccaggct gccggcacct gccccattcc ctggcctggt ttcctaacct 1981 cttcttcctc ccctgccccg cttcccttcc tccaccaccc tgctctcaaa ggcctcctct 2041 ccagacccct ggaagggagg cttccccatc tttagttttc cactctgccc cggggagcac 2101 ccttctactc ctagccacgt cccttgggac cggtgggact ggaggaggaa cggtcaccct 2161 cctcccccat ggaggtttcc aggggtcccc cagacatgaa agaggggtga gctggaggaa 2221 gtcatggtgt cactggggta caggagggtg aatgaagggc atgcaggccc tcagcccggg 2281 ctgtgccagc cctcccagcc ccaggcccat ctgagggacc aagacgctgt tacgcaggcc 2341 cttctttcca gctatcagca ctttcagcat cggctcttca gcagatccaa accccctcag 2401 caacttgcag aggacctgtc ccctctcaaa agtcccctgg cctagggtgg ggacccccaa 2461 acctacggca aagccagcaa cagtagcagc ctgctcccat ttgctgggga ggagatcatc 2521 ttgttcccct ggccccccac tctccctcca tgtccatcca aaaaccataa aatcactggg 2581 ttccacatca gcctccatga ggccaagcct tgtacctgca aggctcttgg cctaaccatt 2641 cctctgtcct cttctctggc ctgcctgggg agcccgtgaa ggccgcacgg gtgcctccag 2701 cctgagacat caggggagag cctgcagctg agttcagcag aaaggaggaa tcctggccct 2761 caggaagaag atagtcacat gtttttcttc cttgtcccca cagcccccag aacaacattc 2821 tccctgctgg cagcccttcc atgtctccaa acctgggtca gagtgaaagg acctttgggg 2881 gtgggtggga gcaaagggcc cacctgctgg ttggtgaaag cagtggtgcc ggagtgctag 2941 gtaccgcacg agagggtgcg ggggcttggg aagcagacca gggttggaca aaaccccatg 3001 agggcgggga gctggaagaa aagtctcttg gggacctctg gggcaaggag ctgagaagtc 3061 ctgcagcacc aggtgagact tgcttacagt ggatgccact tctaggcctc tggaccgcag 3121 atgccctcct ccctcctgca cacctggcct cctgggcctc caggtaaaga gagagagcca 3181 gcccagccct gtttcccctc agtcctcctt tgctcctgct gcttctccca acagcccact 3241 gttaggaggt agtagacccc agcctcaagg ctctgacctt cttcatgtgg gcacagaggg 3301 tcctgacact ctggcagggc ctgagctggg gcaggcctcc ctcagggcca ggggcgatgg 3361 caccccgggg acaggcagac ctccttcctg ccgtcagcac ccccttcctt atcactgtct 3421 ggtctccgag cttcggctgc agcctgaggt gtgtcctggg ctcctcagag cctgaagcaa 3481 gcttttggaa gcctgcagtc ctcccagctc cagtgcagaa gcctctctct ccagcctttc 3541 cccaggcagg agttggggtt gggggcctct gtccctcatc gcttaccttg gaaaggtggg 3601 aagctggcaa tctgcacctt ggggcctggg ctccccctct ctgtgccagc ggcttcccag 3661 cacctgggag gggctgcagc cccagctgga ctccagcctg tccctcttag cactctagct 3721 gcccactcca gggcagggac tcgaaacccc ctccgtcctg agcagccacc tccagggccc 3781 tgtttgggac cactctctca gtccccaggt cctcagggcc ccagagcggg agggtctcct 3841 acctggaagt ccccctgagc tccagggccc agccctacct gccagtgctg gtgtcagggc 3901 actcaacacc gagtgtgggg gccacgcccc ttgccatgcc cacggcctcc tcctgtagcc 3961 cctgcctgca cccacgatgc tgcacgggcc cgccctggtg gggctcggcg agtaatgtgt 4021 tttgtcccca gttaaccacc attctgcggc ctggttctgc aaggaaccag ggctgcccca 4081 ccgcccgccg tctgccgccc taggcttcct gactccatta gttccgacac ttgtgaaact 4141 ccgagaagtg ctgtggtctc agcaatgcac ctgttttgta catgattgtg taatttaaag 4201 gtatataaat acaaatatat atatatatca gttgtgattg tatgactgtg gataaaatcc 4261 agaactgtgt caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //