LOCUS BC040188 2285 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens chondroadherin-like, mRNA (cDNA clone IMAGE:4811536),
partial cds.
ACCESSION BC040188
VERSION BC040188.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2285)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2285)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: k Column: 24.
FEATURES Location/Qualifiers
source 1..2285
/db_xref="H-InvDB:HIT000096053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4811536"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2285
/gene="CHADL"
/gene_synonym="SLRR4B"
/db_xref="GeneID:150356"
/db_xref="HGNC:HGNC:25165"
CDS <1..2079
/gene="CHADL"
/gene_synonym="SLRR4B"
/codon_start=1
/product="CHADL protein"
/protein_id="AAH40188.1"
/db_xref="GeneID:150356"
/db_xref="HGNC:HGNC:25165"
/translation="SGVPGGMEGPRSSTHVTLVLPLLVLLLLAPARQAATQRCPQACI
CDNSRRHVACRYQNLTEVPDAIPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHC
EVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEGLRPGTF
GALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLS
LHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALG
PRAFAHCPRLHTLDLRGNQLDTLPPLQGPGQLRRLRLQGNPLWCGCQARPLLEWLARA
RVRSDGACQGPRRLRGEALDALRPWDLRCPGDAAQEEEELEERAVAGPRAPPRGPPRG
PGEERAVAPCPRACVCVPESRHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAA
FPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYVYLSDNQLAGLSAAALEGAPRLGYL
YLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEV
SLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGR
SLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPALPSARRTPIKGRQCGA
DKVGKEKGRL"
BASE COUNT 332 a 815 c 776 g 362 t
ORIGIN
1 agcggagttc caggcggcat ggaggggccc cggagctcca cccatgtcac cttggtgctg
61 ccgcttcttg tacttctgct gctggccccg gctaggcagg ccgccaccca gcgctgccca
121 caggcctgca tctgtgacaa ctccaggcga cacgttgcct gccggtacca gaacctcact
181 gaggtgccag acgccatccc tgagctgacc cagcggctgg acctgcaggg caatttgctg
241 aaggtgatcc ccgcagccgc cttccagggc gtgcctcacc tcacacacct ggacctgcgc
301 cactgcgagg tggagctggt ggccgagggc gccttccgtg gcctgggccg cctgctcctg
361 ctcaacctgg cctccaacca cctgcgtgag ctgccccagg aggcgctgga cgggctgggc
421 tcgttgcggc ggctggagct ggaggggaac gcactggagg ggctgcggcc ggggacgttc
481 ggggcactgg gtgcgctggc cacgctaaac ctggcccaca acgccctggt ttacctgccc
541 gccatggcct tccaggggct actgcgcgtc cgctggctgc ggctgtcgca caacgcgctc
601 agcgtgctgg cccccgaggc cctggctggc ctgcccgccc tgagacggct cagcctacac
661 cacaacgagc tccaggctct gcccgggcct gtcttgtccc aggcccgcgg cctggcccgt
721 ctggagctgg gccacaaccc gctcacctac gcgggcgagg aggacgggct ggcgctgccc
781 ggcctgcggg agctgctgct ggacggcggg gccctgcagg ccctgggtcc cagggccttc
841 gcacactgtc cgcgcctgca caccctcgac ctccgcggga accagctaga caccctgccc
901 ccgctgcagg gcccgggcca gctgcgccgg ctgcggctgc aggggaatcc gctgtggtgc
961 ggctgccagg cgcggcccct actcgagtgg ctggcgcggg cgcgcgtgcg ctcggacggc
1021 gcgtgccagg ggccgcggcg cctgcggggc gaggctctgg acgccctgcg gccctgggac
1081 ctgcgctgcc ctggggacgc ggcgcaggaa gaggaagagc tggaagagcg ggctgtggcc
1141 gggccccgcg cccctccgcg cggccctccg cgcggccccg gggaggagcg ggcagtcgcg
1201 ccttgccctc gcgcctgcgt gtgcgtcccc gagtcccggc acagcagctg cgagggctgc
1261 ggcctgcagg cggtgccccg cggcttcccc agcgacaccc agctcctgga cctgaggcgg
1321 aaccacttcc cctcggtgcc ccgagcggcc ttccccggcc tgggccacct ggtgtcgctg
1381 cacctgcagc actgcggcat cgcggagctg gaagcgggcg ccctggccgg gctgggccgc
1441 ctgatctacg tgtacctctc cgacaaccag ctcgcaggcc tcagcgctgc tgcccttgaa
1501 ggagctcccc gcctcggcta cctgtaccta gaacgcaacc gtttcctgca ggtgccaggg
1561 gctgccctgc gcgccctgcc cagcctcttc tccctgcacc tgcaggacaa cgctgtggac
1621 cgcctggcac ctggggacct ggggagaaca cgggccttgc gctgggtcta cctgagtgga
1681 aaccgcatca ccgaagtgtc ccttggggcg ctgggcccag ctcgggagct ggagaagctg
1741 cacctggaca ggaatcagct gcgagaggtg cccactgggg ccttggaggg gctgcctgcc
1801 ctcctggagc tgcagctctc gggcaaccca ctcagggcct tacgtgacgg agccttccag
1861 cctgtgggca ggtcgctgca gcacctcttc ctgaacagca gtggcctgga gcagatttgt
1921 cctggggcct tttcaggcct ggggcccggg ctccagagcc tgcacctgca gaagaaccag
1981 cttcgggccc tgcctgccct gcccagtgcc aggagaaccc ccatcaaagg aagacagtgt
2041 ggagcagata aggtggggaa ggagaagggt cgtctctgag cacggagcag gctggtcctg
2101 ccttgaccca gcccggtggc tcttactctc gccaggaaca ggctccgacg agatcttcct
2161 ggcaccctga gggtcgtcct ccagcagggg cttcttggac ccctgtctga ggggtcgcgt
2221 cttagtgggc gggattcttt tccctttgaa taaaaatgga ttcaaaccca aaaaaaaaaa
2281 aaaaa
//