LOCUS BC040185 2802 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 51, mRNA (cDNA
clone MGC:42193 IMAGE:4801253), complete cds.
ACCESSION BC040185
VERSION BC040185.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2802)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC040185.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: k Column: 13.
FEATURES Location/Qualifiers
source 1..2802
/db_xref="H-InvDB:HIT000052341"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42193 IMAGE:4801253"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2802
/gene="DDX51"
/gene_synonym="MGC42193"
/db_xref="GeneID:317781"
/db_xref="HGNC:HGNC:20082"
CDS 13..2013
/gene="DDX51"
/gene_synonym="MGC42193"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 51"
/protein_id="AAH40185.1"
/db_xref="GeneID:317781"
/db_xref="HGNC:HGNC:20082"
/translation="MALFYVARYPGPDAAAAAGPEGAEAGAHGRARALLERLQSQARE
RQQQREPAQTEAAASTEPATRRRRRPRRRRRVNDAEPGSPEAPQGKRRKADGEDAGAE
SNEEAPGEPSAGSSEEAQGGPSAGSSEEAPGVRSTSASAEAAPDGPALEEAAGPLVPG
LVLGGFGKRKAPKVKPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGI
SSYFPVQAAVIPALLESAACGFLVGRGGYRLSDLCVSAPTGSGKTLAFVIPVVQALLS
RVVCHIRALVVLPTKELARQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQKTAD
GYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA
FQSEDPADPCALLKRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR
LFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVL
CFTNSRENSHRLFLLVQAFGGVDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATA
RGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEA
GAPELQRHELSSKLLQPLVPRYEEALSKLEESVKEERKQRAA"
BASE COUNT 587 a 822 c 928 g 465 t
ORIGIN
1 gtgtggctgg ccatggcgct gttctacgtc gcgcggtacc cgggccccga tgcggcagct
61 gcggcggggc cggagggcgc ggaggccggg gcgcacggca gggcccgcgc gctgctcgag
121 cggctgcaga gccaggcccg cgaacggcag cagcagcggg agcccgcgca gaccgaggcg
181 gctgcatcga ccgagccggc gaccaggagg cgacggcggc cccggcggcg gcggcgggtg
241 aacgacgcgg agccggggag cccggaggcg ccgcagggaa agcgacggaa ggcggacggc
301 gaggacgcgg gcgcagaaag caacgaggag gcgccagggg agcccagcgc agggagcagc
361 gaggaggcgc aaggggggcc cagcgcaggg agcagcgagg aggcgccggg ggtgcgcagc
421 accagcgcca gcgccgaggc ggccccagat ggaccggccc tggaggaggc ggccggaccc
481 ctggtccccg gcctggtgct gggggggttc gggaagagga aggcgccgaa ggtcaagcct
541 ttcctgccaa ggtggctggc tgagcctaac tgtgtcagaa ggaatgtcac cgaagacctg
601 gttcctatcg aggacatccc tgacgtccat cctgacctgc agaagcagct gcgggcacac
661 ggcatctcgt cctactttcc agtccaggca gctgtgattc ctgccctcct ggagagcgca
721 gcctgtgggt ttctggtggg cagaggtggc taccggctta gcgacctctg tgtttctgcc
781 ccaacaggca gtgggaagac actggccttc gtcatccctg tggtgcaggc cctgctttcg
841 agagtggtct gccacatccg tgccctggtt gtgctgccca ccaaggagct ggcccggcag
901 gtgagcaaag ttttcaacat ctacacagat gccacacctc tgagagtctc cctggttacg
961 ggacagaagt ctctggccaa ggagcaggag agcctcgtcc agaaaacagc tgatgggtac
1021 cgctgcttgg ctgacatcgt ggtagccacc cccggccgcc tggtggacca catcgaccag
1081 accccaggat tcagcctcca gcagctccgc ttcctgatta tcgacgaggc tgaccggatg
1141 attgacagca tgcatcagtc ctggctgccg cgggtggtgg cggccgcctt ccagagcgag
1201 gaccccgcgg acccctgtgc cctgctcaag cgaaggcagg cccaggctgt gacagccgcc
1261 agcacctgct gtccccagat gcccctgcag aagctgctct tctcagctac tctgacccag
1321 aaccctgaaa agctgcagca gctgggcctc caccagcccc ggcttttctc cacagggcta
1381 gcacacaggg gcctggaaga tacagatggg gacggggatt cggggaagta tgcctttcct
1441 gttgggctca cgcaccacta cgtgccctgc agcctcagct ctaagccgct ggtcgtcctg
1501 cacctggtcc tggagatggg cttctcgagg gttctctgct tcactaactc ccgagagaac
1561 tcccacaggc tcttcctgct ggtgcaagct tttgggggtg tggacgtggc tgagttctcc
1621 tcgcgctacg ggcctggcca gaggaggatg atcctgaagc agtttgaaca ggggaagatc
1681 cagctgctca tcagcacgga cgccaccgcg cgaggcatcg acgtgcaggg tgtggagctg
1741 gtggtgaact acgacgcccc ccagtacctg agaacctacg tgcaccgggt tgggaggaca
1801 gctcgcgctg ggaaaactgg acaggccttc acactgctcc tgaaagtgca ggagaggaga
1861 ttcctccgaa tgctaactga agctggggca cctgagttgc agcggcacga gctctccagc
1921 aagctgctgc agccgctggt tcctcggtac gaggaggccc tgtccaagct ggaggagtct
1981 gtcaaggaag agcgcaagca gagggcggcc taggctgggg ctcagagggc cggagggact
2041 gaacgctcac caccctgacc ctccttccag agcagtgctg atcactggat cctgtatgtg
2101 aggaaaggaa tcccccagtg gacacagcct tcctccccaa gcacgtggtc tctgcgccag
2161 gcagccaggg cgtcagagct caagcacctg ccccgactgg agacttcagg gcttgtcact
2221 ttcagagtgt ggaggtcagg atggctgcgg gcaatgaagc cttagtaaaa cggtgaaaag
2281 tactcccaga cggacgcggg cacccgtcat gcttttgctg agagttgggg gcattaacct
2341 tgagctaatg ttaaaaatca agctcttggc caggcatggt ggctcatgcc tgtaattcca
2401 gcactttggg aggccaaggc gggtggatca cctgaggtca cgagttcgag accagcctga
2461 ccaacatgga gaaaccctgt ctctactaaa aatacaaaat tagccaggcg tggtggtgca
2521 tgcctgtaat ccagctactt gggaggctga ggcaggaaaa tggcttgaac ccgggaggtg
2581 gaggttgcag tgagctgaga ttgcgccact gcactccagc ctgggcaaca agagcaaaac
2641 tccgtctcaa aaaaaaaaat tgccgggcgc ggtggcaaat gcctgtaatc ccagcacttt
2701 gggaggccga ggcaggtgga tcacaaggtc aggagataga gaccatcatt gctaacatgg
2761 tgaaaccccg tctctactaa aaatgcaaaa aaaaaaaaaa aa
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