LOCUS BC040168 2016 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog
(avian), mRNA (cDNA clone MGC:49020 IMAGE:6052140), complete cds.
ACCESSION BC040168
VERSION BC040168.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2016)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2016)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46255022.
FEATURES Location/Qualifiers
source 1..2016
/db_xref="H-InvDB:HIT000052336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49020 IMAGE:6052140"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2016
/gene="ERG"
/gene_synonym="erg-3"
/gene_synonym="p55"
/db_xref="GeneID:2078"
/db_xref="HGNC:HGNC:3446"
/db_xref="MIM:165080"
CDS 104..1543
/gene="ERG"
/gene_synonym="erg-3"
/gene_synonym="p55"
/codon_start=1
/product="v-ets erythroblastosis virus E26 oncogene
homolog (avian)"
/protein_id="AAH40168.1"
/db_xref="GeneID:2078"
/db_xref="HGNC:HGNC:3446"
/db_xref="MIM:165080"
/translation="MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQT
SKMSPRVPQQDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGM
NYGSYMEEKHMPPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLF
QNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRL
MHARNTGGAAFIFPNTSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPS
PSTVPKTEDQRPQLDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEG
TNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDF
HGIAQALQPHPPESSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPN
PYWNSPTGGIYPNTRLPTSHMPSHLGTYY"
BASE COUNT 598 a 549 c 448 g 421 t
ORIGIN
1 aatctcatcc gctctaaaca acctcatcaa aactactttc tggtcagaga gaagcaataa
61 ttattattaa catttattaa cgatcaataa acttgattgc attatggcca gcactattaa
121 ggaagcctta tcagttgtga gtgaggacca gtcgttgttt gagtgtgcct acggaacgcc
181 acacctggct aagacagaga tgaccgcgtc ctcctccagc gactatggac agacttccaa
241 gatgagccca cgcgtccctc agcaggattg gctgtctcaa cccccagcca gggtcaccat
301 caaaatggaa tgtaacccta gccaggtgaa tggctcaagg aactctcctg atgaatgcag
361 tgtggccaaa ggcgggaaga tggtgggcag cccagacacc gttgggatga actacggcag
421 ctacatggag gagaagcaca tgccaccccc aaacatgacc acgaacgagc gcagagttat
481 cgtgccagca gatcctacgc tatggagtac agaccatgtg cggcagtggc tggagtgggc
541 ggtgaaagaa tatggccttc cagacgtcaa catcttgtta ttccagaaca tcgatgggaa
601 ggaactgtgc aagatgacca aggacgactt ccagaggctc acccccagct acaatgccga
661 catccttctc tcacatctcc actacctcag agagactcct cttccacatt tgacttcaga
721 tgatgttgat aaagccttac aaaactctcc acggttaatg catgctagaa acacaggggg
781 tgcagctttt attttcccaa atacttcagt atatcctgaa gctacgcaaa gaattacaac
841 taggccagat ttaccatatg agccccccag gagatcagcc tggaccggtc acggccaccc
901 cacgccccag tcgaaagctg ctcaaccatc tccttccaca gtgcccaaaa ctgaagacca
961 gcgtcctcag ttagatcctt atcagattct tggaccaaca agtagccgcc ttgcaaatcc
1021 aggcagtggc cagatccagc tttggcagtt cctcctggag ctcctgtcgg acagctccaa
1081 ctccagctgc atcacctggg aaggcaccaa cggggagttc aagatgacgg atcccgacga
1141 ggtggcccgg cgctggggag agcggaagag caaacccaac atgaactacg ataagctcag
1201 ccgcgccctc cgttactact atgacaagaa catcatgacc aaggtccatg ggaagcgcta
1261 cgcctacaag ttcgacttcc acgggatcgc ccaggccctc cagccccacc ccccggagtc
1321 atctctgtac aagtacccct cagacctccc gtacatgggc tcctatcacg cccacccaca
1381 gaagatgaac tttgtggcgc cccaccctcc agccctcccc gtgacatctt ccagtttttt
1441 tgctgcccca aacccatact ggaattcacc aactgggggt atatacccca acactaggct
1501 ccccaccagc catatgcctt ctcatctggg cacttactac taaagacctg gcggaggctt
1561 ttcccatcag cgtgcattca ccagcccatc gccacaaact ctatcggaga acatgaatca
1621 aaagtgcctc aagaggaatg aaaaaagctt tactggggct ggggaaggaa gccggggaag
1681 agatccaaag actcttggga gggagttact gaagtcttac tacagaaatg aggaggatgc
1741 taaaaatgtc acgaatatgg acatatcatc tgtggactga ccttgtaaaa gacagtgtat
1801 gtagaagcat gaagtcttaa ggacaaagtg ccaaagaaag tggtcttaag aaatgtataa
1861 actttagagt agagtttgga atcccactaa tgcaaactgg gatgaaacta aagcaataga
1921 aacaacacag ttttgaccta acataccgtt tataatgcca ttttaaggaa aactacctgt
1981 atttaaaaat agaaacatat caaaaaaaaa aaaaaa
//