LOCUS BC040164 2465 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens phosphotyrosine interaction domain containing 1, mRNA
(cDNA clone MGC:48969 IMAGE:5589172), complete cds.
ACCESSION BC040164
VERSION BC040164.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2465)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2465)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: i Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255259.
FEATURES Location/Qualifiers
source 1..2465
/db_xref="H-InvDB:HIT000052334"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48969 IMAGE:5589172"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2465
/gene="PID1"
/gene_synonym="FLJ20701"
/gene_synonym="HMFN2073"
/gene_synonym="NYGGF4"
/db_xref="GeneID:55022"
/db_xref="HGNC:HGNC:26084"
CDS 233..739
/gene="PID1"
/gene_synonym="FLJ20701"
/gene_synonym="HMFN2073"
/gene_synonym="NYGGF4"
/codon_start=1
/product="PID1 protein"
/protein_id="AAH40164.1"
/db_xref="GeneID:55022"
/db_xref="HGNC:HGNC:26084"
/translation="MWQPATERLQVTYLGKVSTTGMQFLSGCTEKPVIELWKKHTLAR
EDVFPANALLEIRPFQVWLHHLDHKGEATVHMDTFQVARIAYCTADHNVSPNIFAWVY
REINDDLSYQMDCHAVECESKLEAKKLAHAMMEAFRKTFHSMKSDGRIHSNSSSEEVS
QELESDDG"
BASE COUNT 725 a 590 c 547 g 603 t
ORIGIN
1 cagctgcgcc aggacagccg gcgcgcggcc gtgcccacaa gttgccggca gctgagcgcc
61 gcgcctcctc ctgctcgcag ccccctacgc ccacccggcg gcggtggcca gcgccaggac
121 gcacatcccg cggacaccga ccccagatgt aaagcgggac cccagcccct cgccccccgg
181 cgcgatcgac agtctcgcca gcgtctcctc tgccaaaacc cagggctgga agatgtggca
241 gccggccacg gagcgcctgc aggttaccta cctgggcaaa gtctccacca ctggcatgca
301 gtttttgtca ggctgcacag aaaagccagt cattgagctc tggaagaagc acacgctagc
361 ccgagaggat gtctttccgg ccaatgccct cctggaaatc cggccattcc aagtttggct
421 ccatcatctc gaccacaaag gggaggccac agtgcacatg gataccttcc aggtggcccg
481 catcgcctac tgcaccgccg accacaacgt gagccccaac atcttcgcct gggtctacag
541 ggagatcaat gatgacctgt cctaccagat ggactgccac gccgtggagt gcgagagcaa
601 gctcgaggcc aagaaactgg cccacgccat gatggaggcc ttcaggaaga ctttccacag
661 tatgaagagc gacgggcgga tccacagcaa cagctcctcc gaagaggttt cccaggaatt
721 ggaatccgat gatggctgaa tgaacttgag acgcttcagc aaaggcagca ttggtcacgg
781 agttcaaggg aatagatgag taagcaacgt ttcaaatttg ggatgaaaag actgccaaac
841 tattggctga ccaaggtttt taaattcaga agagcaattc taaatctaaa gaaatgtatc
901 attaaagtaa ttacgttaca ttgaaacctg ctgctgctgt gactgtgagg agggtgggag
961 tgtggatggg gaggaaggtt ctaggctctc ttatttttct catttcccaa tgcctctctg
1021 tgggagagct ccatgccagt tttcaccacg ctcaggcaaa tactctgcag ctgttattgg
1081 atgggccatt ccgatctgcc ttatgaaatt ccacaagaat gttaggggca cctatgggat
1141 ctctagtggg gtgggcaggg tgctgatggg gacgctggcc gcagggagga aggaacatct
1201 cgggagggcc ctctgttcct ctcccacggc agatgccctc ctctgtatgc aaatcagcac
1261 agcctttatt gagctttaca actaacaacc tgatagttgg cagttaattc acagttacag
1321 ataatgcttt tatttacata aatataccaa gtagtaccct cttattgtat tcacttcatc
1381 tattttctta gaatacttgc aattactaat gaccccttcc ctttccctcc tgctgccctg
1441 tccaccctct ttccccttct aacatcctta gagggatgaa atctcagcat atgttgcagg
1501 acaccaaaag gaagaaaaca atcaagcaaa taaaataaac agtcaaacaa accaggagtt
1561 taaaacaaca accccaacaa cagaagcctt ggcaaagagg aataagtgat cagcaagtga
1621 acacactcta tgtcaactct ccttttatcc agctgagatt tatggtaact tatttaatta
1681 atggtcctgt ctgatgcatc cttgatggca agcttcaaat ctgatttggt atcaccgagg
1741 aaaccttgcc cccatcactc agcattgcac ttagatacag aatgagttag ataaacttgg
1801 cttgtctaga gacccatgtc atcttaacct aaagggaaat cttattgcgt tatcataaaa
1861 ttgatgatat cttagggtca gaattgccct ttttttttat tttgaatggg aagttctcac
1921 taaaacaatc ctgagatttc ttaatttcat ggttctttaa atattataaa cacagagtca
1981 acatagaatg aaattgtatt tgttaaaata cacacattgg aggacaagag cagatgacta
2041 cttttcgaag taatgctgct ccttcctaaa agtctgtttt caatcctggt aatattaggg
2101 gcactgcggc acctaagaag ccttaaatga gagctaatcc aatctagaga gcgatggtgt
2161 cagcatttcg gtctgcatat ctgtgtgtcc gtatctgcgt ttgtgtgcgt gtacgtgtgc
2221 ccctgtgtgt gggcccagtt ttcaggcatg tagaataagc atggagtcat attgaggagg
2281 actcacttct tgaagatatg cttgttgctt tacaacatat gtaagctatt ctttagcata
2341 aatgcattca ttctttaata aaaatatgtt tgcattaata aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaa
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