LOCUS BC040138 1795 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens solute carrier family 12 (sodium/potassium/chloride transporters), member 1, mRNA (cDNA clone IMAGE:5184259), complete cds. ACCESSION BC040138 VERSION BC040138.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1795) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1795) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC040138.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: d Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557848 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1795 /db_xref="H-InvDB:HIT000052329" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5184259" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1795 /gene="SLC12A1" /gene_synonym="BSC1" /gene_synonym="NKCC2" /db_xref="GeneID:6557" /db_xref="MIM:600839" CDS 187..1479 /gene="SLC12A1" /gene_synonym="BSC1" /gene_synonym="NKCC2" /codon_start=1 /product="SLC12A1 protein" /protein_id="AAH40138.1" /db_xref="GeneID:6557" /db_xref="MIM:600839" /translation="MSLNNSSNVFLDSVPSNTNRFQVSVINENHESSAAADDNTDPPH YEETSFGDEAQKRLRISFRPGNQECYDNFLQSGETAKTDASFHAYDSHTNTYYLQTFG HNTMDAVPKIEYYRNTGSISGPKVNRPSLLEIHEQLAKNVAVTPSSADRVANGDGIPG DEQAENKEDDQAGVVKFGWVKGVLVRCMLNIWGVMLFIRLSWIVGEAGIGLGVLIILL STMVTSITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYV VGFAETVVDLLKESDSMMVDPTNDIRIIGSITVVILLGISVAGMEWEAKAQVILLVIL LIAIANFFIGTVIPSNNEKKSRGFFNYQASIFAENFGPRFTKGEGFFSVFAIFFPAAT GILAGANISGDLEALRKQGASPLPQGAQSRRRRQTSLI" BASE COUNT 572 a 337 c 410 g 476 t ORIGIN 1 ctttgaagaa catcctgaag attatatcgg agacaatata tcaagaatct atttattgaa 61 tcatctagaa caaaagccag gagctcccta atggaagcac attagtgttt attttgatga 121 agaaatatat agatttttta aaacaaccac aaagtagata gctcagtaaa aaatcaattt 181 tggaagatgt cactgaacaa ctcttccaat gtatttctgg attcagtgcc cagtaatacc 241 aatcgctttc aagttagtgt cataaatgag aaccatgaga gcagtgcagc tgcagatgac 301 aatactgacc caccacatta tgaagaaacc tcttttgggg atgaagctca gaaaagactc 361 agaatcagct ttaggcctgg gaatcaggag tgctatgaca atttcctcca aagtggagaa 421 actgctaaaa cagatgccag ttttcacgct tatgattctc acacaaacac atactatcta 481 caaacttttg gccacaacac catggatgcc gttcccaaga tagagtacta tcgtaacacc 541 ggcagcatca gtgggcccaa ggtcaaccga cccagcctgc ttgagattca cgagcaactc 601 gcaaagaatg tggcagtcac cccaagttca gctgacagag ttgctaacgg tgatgggata 661 cctggagatg aacaagctga aaataaggaa gatgatcaag ctggtgttgt gaagtttgga 721 tgggtgaaag gtgtgctggt aagatgcatg ctgaacatct ggggagtcat gctcttcatt 781 cgcctctcct ggattgttgg agaagctgga attggtcttg gagttctcat aattcttctt 841 tccaccatgg taacttctat tactgggttg tcaacttctg cgatagcaac taacgggttt 901 gttcgtggag gtggggccta ctatcttatt tccagaagtt tagggcccga gttcggtggg 961 tcaataggcc tgatctttgc ttttgctaat gcagtggctg ttgctatgta tgtggtggga 1021 tttgctgaga ctgtagtaga tcttcttaag gagagtgatt cgatgatggt ggatccaacc 1081 aatgacatcc ggattatagg ctccatcaca gtggtgattc ttctaggaat ttcagtagct 1141 ggaatggaat gggaggcaaa ggcccaagtc attcttctgg tcattcttct aattgctatt 1201 gcaaacttct tcattggaac tgtcattcca tccaacaatg agaaaaagtc cagaggtttc 1261 tttaattacc aagcatcaat atttgcagaa aactttgggc cacgcttcac aaagggtgaa 1321 ggcttcttct ctgtctttgc catttttttc ccagcagcta ctgggattct tgctggtgcc 1381 aatatctcag gagatttgga ggcactgagg aaacaaggag cttcacctct ccctcaagga 1441 gctcagagtc gaaggaggag acagacttcc cttatatgaa ttagaacaag caagagtaga 1501 atcaagtgca aaggaaagag gaagcagaaa ttgcctgtcc cctcaaaaag taaaggaaga 1561 ctttcagaag aggggacact caatccaggt tttgagggat gaacaggagt ttgccgacag 1621 gacaaagaag agacggacat ttgaaacaga aggaatggga tgtaagaagg caccaagaaa 1681 gatgctgcta atgagaatta ttttatgtgc agagtagtgt atgtaatcct tcattaatat 1741 attaataaac atatttataa ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //