LOCUS BC040129 1168 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens UBX domain protein 1, mRNA (cDNA clone MGC:48785 IMAGE:6065505), complete cds. ACCESSION BC040129 VERSION BC040129.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1168) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1168) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: p Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147677. FEATURES Location/Qualifiers source 1..1168 /db_xref="H-InvDB:HIT000052326" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48785 IMAGE:6065505" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1168 /gene="UBXN1" /gene_synonym="2B28" /gene_synonym="UBXD10" /db_xref="GeneID:51035" /db_xref="HGNC:HGNC:18402" CDS 170..1063 /gene="UBXN1" /gene_synonym="2B28" /gene_synonym="UBXD10" /codon_start=1 /product="UBXN1 protein" /protein_id="AAH40129.1" /db_xref="GeneID:51035" /db_xref="HGNC:HGNC:18402" /translation="MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHED DPDVDEPLETPLGHILGREPTSSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELV AQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKAEELAA RQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQV RLPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGGQDPVQLLSGFPRRAFSEADMER PLQELGLVPSAVLIVAKKCPS" BASE COUNT 269 a 315 c 382 g 202 t ORIGIN 1 cacgcgtccg ctcggctttc ttctcgtcgg tgttcccggc tgctatagag ccgggtgaga 61 gagcgagcgc ccgtcggcgg gtgtcgaggg cgggttgcct cgcgctgacc cttcccgccc 121 tccttctcgt cacacaccag gtccccgcgg aagccgcggt gtcggcgcca tggcggagct 181 gacggctctt gagagtctca tcgagatggg cttccccagg ggacgcgcgg agaaggctct 241 ggccctcaca gggaaccagg gcatcgaggc tgcgatggac tggctgatgg agcacgaaga 301 cgaccccgat gtggacgagc ctttagagac tccccttgga catatcctgg gacgggagcc 361 cacttcctca gagcaaggcg gccttgaagg atctggttct gctgccggag aaggcaaacc 421 cgctttgagt gaagaggaaa gacaggaaca aactaagagg atgttggagc tggtggccca 481 gaagcagcgg gagcgtgaag aaagagagga acgggaggca ttggaacggg aacggcagcg 541 caggagacaa gggcaagagt tgtcagcagc acgacagcgg ctacaggaag atgagatgcg 601 ccgggctgct gaggagaggc ggagggaaaa ggccgaggag ttagcagcca gacaaagagt 661 tagagaaaag atcgagaggg acaaagcaga gagagccaag aagtatggtg gcagtgtggg 721 ctctcagcca cccccagtgg caccagagcc aggtcctgtt ccctcttctc ccagccagga 781 gcctcccacc aagcgggagt atgaccagtg tcgcatacag gtcaggctgc cagatgggac 841 ctcactgacc cagacgttcc gggcccggga acagctggca gctgtgaggc tctatgtgga 901 gctccaccgt ggggaggaac taggtggggg ccaggaccct gtgcaattgc tcagtggctt 961 ccccagacgg gccttctcag aagctgacat ggagcggcct ctgcaggagc tgggactcgt 1021 gccttctgct gttctcattg tggccaagaa atgtcccagc tgagggcctt tgtcccattg 1081 tccctctgtg accccttcat ctttgataaa gcactgacat ctccttccta ataaatagac 1141 cctgagttct gtaaaaaaaa aaaaaaaa //