LOCUS BC040129 1168 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens UBX domain protein 1, mRNA (cDNA clone MGC:48785
IMAGE:6065505), complete cds.
ACCESSION BC040129
VERSION BC040129.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1168)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1168)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147677.
FEATURES Location/Qualifiers
source 1..1168
/db_xref="H-InvDB:HIT000052326"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48785 IMAGE:6065505"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1168
/gene="UBXN1"
/gene_synonym="2B28"
/gene_synonym="UBXD10"
/db_xref="GeneID:51035"
/db_xref="HGNC:HGNC:18402"
CDS 170..1063
/gene="UBXN1"
/gene_synonym="2B28"
/gene_synonym="UBXD10"
/codon_start=1
/product="UBXN1 protein"
/protein_id="AAH40129.1"
/db_xref="GeneID:51035"
/db_xref="HGNC:HGNC:18402"
/translation="MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHED
DPDVDEPLETPLGHILGREPTSSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELV
AQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKAEELAA
RQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQV
RLPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGGQDPVQLLSGFPRRAFSEADMER
PLQELGLVPSAVLIVAKKCPS"
BASE COUNT 269 a 315 c 382 g 202 t
ORIGIN
1 cacgcgtccg ctcggctttc ttctcgtcgg tgttcccggc tgctatagag ccgggtgaga
61 gagcgagcgc ccgtcggcgg gtgtcgaggg cgggttgcct cgcgctgacc cttcccgccc
121 tccttctcgt cacacaccag gtccccgcgg aagccgcggt gtcggcgcca tggcggagct
181 gacggctctt gagagtctca tcgagatggg cttccccagg ggacgcgcgg agaaggctct
241 ggccctcaca gggaaccagg gcatcgaggc tgcgatggac tggctgatgg agcacgaaga
301 cgaccccgat gtggacgagc ctttagagac tccccttgga catatcctgg gacgggagcc
361 cacttcctca gagcaaggcg gccttgaagg atctggttct gctgccggag aaggcaaacc
421 cgctttgagt gaagaggaaa gacaggaaca aactaagagg atgttggagc tggtggccca
481 gaagcagcgg gagcgtgaag aaagagagga acgggaggca ttggaacggg aacggcagcg
541 caggagacaa gggcaagagt tgtcagcagc acgacagcgg ctacaggaag atgagatgcg
601 ccgggctgct gaggagaggc ggagggaaaa ggccgaggag ttagcagcca gacaaagagt
661 tagagaaaag atcgagaggg acaaagcaga gagagccaag aagtatggtg gcagtgtggg
721 ctctcagcca cccccagtgg caccagagcc aggtcctgtt ccctcttctc ccagccagga
781 gcctcccacc aagcgggagt atgaccagtg tcgcatacag gtcaggctgc cagatgggac
841 ctcactgacc cagacgttcc gggcccggga acagctggca gctgtgaggc tctatgtgga
901 gctccaccgt ggggaggaac taggtggggg ccaggaccct gtgcaattgc tcagtggctt
961 ccccagacgg gccttctcag aagctgacat ggagcggcct ctgcaggagc tgggactcgt
1021 gccttctgct gttctcattg tggccaagaa atgtcccagc tgagggcctt tgtcccattg
1081 tccctctgtg accccttcat ctttgataaa gcactgacat ctccttccta ataaatagac
1141 cctgagttct gtaaaaaaaa aaaaaaaa
//