LOCUS       BC040127                1178 bp    mRNA    linear   HUM 06-JUN-2005
DEFINITION  Homo sapiens PRP38 pre-mRNA processing factor 38 (yeast) domain
            containing B, mRNA (cDNA clone IMAGE:6042535), partial cds.
ACCESSION   BC040127
VERSION     BC040127.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1178)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 84 Row: n Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 8922357.
FEATURES             Location/Qualifiers
     source          1..1178
                     /db_xref="H-InvDB:HIT000096009"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:6042535"
                     /tissue_type="Testis, embryonal carcinoma"
                     /clone_lib="NIH_MGC_92"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..>1178
                     /gene="PRPF38B"
                     /gene_synonym="FLJ10330"
                     /db_xref="GeneID:55119"
     CDS             270..>1178
                     /gene="PRPF38B"
                     /gene_synonym="FLJ10330"
                     /codon_start=1
                     /product="PRPF38B protein"
                     /protein_id="AAH40127.1"
                     /db_xref="GeneID:55119"
                     /translation="MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATKPAVSGKQG
                     NVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKG
                     SRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL
                     GFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLF
                     PRIPVPVQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRS
                     RSRSHHREGHGSSSFDRDREREKKKKK"
BASE COUNT          301 a          302 c          324 g          251 t
ORIGIN      
        1 gggcagttgg cggaagagat cgagctccct ggctgccggc tcgccttctg cgtggagttc
       61 tcgcggtctg ggtttcgctg tctgctcttg gcccggggtc attttgtcgg cgtcgggtgc
      121 cctctcttgc ccagctgggg cacagcgagg cggccccttc tcccgacgac gttcgatgga
      181 gtagggtccc agaccgttgt cccgaagagc gagatcgagc ttggccccct cccccccctc
      241 cttccctccc tccttccttc cgccgcaaca tggctaacaa cagccccgcg ctgacaggca
      301 actcgcagcc gcagcaccag gcggctgcag ctgcggctca gcaacagcag cagtgcggcg
      361 gcggcggcgc taccaagccg gcggtctccg gcaagcaggg caatgtgctc ccgctctggg
      421 gcaacgagaa gaccatgaac ctcaacccca tgatcctgac caacatcctg tcgtcgcctt
      481 acttcaaagt acagctctac gagctcaaga cctaccacga ggtggtggac gagatctact
      541 ttaaggtcac gcacgttgaa ccatgggaga aaggaagcag gaaaacagcg ggccagacag
      601 ggatgtgcgg aggggttcga ggtgttggaa caggaggaat tgtttctaca gcattttgcc
      661 tgttatacaa attatttacc ctgaagttaa ctcgaaagca agtgatgggt cttataacac
      721 acacagactc tccatatatt agagcgcttg gatttatgta tataagatat acacagcccc
      781 ctacagatct gtgggactgg tttgaatcct tccttgatga tgaagaggac ctagatgtga
      841 aggctggtgg aggctgtgta atgaccattg gagaaatgct acgatctttt ctcacaaaac
      901 tggagtggtt ttctaccttg tttccaagaa ttccagttcc agttcaaaag aatattgatc
      961 aacagattaa aacccgacct agaaaaatca agaaagatgg gaaggaaggt gctgaggaaa
     1021 tagacagaca tgttgaacgc agacgttcaa ggtctccaag gagatctctg agtccacgga
     1081 ggtccccaag aaggtcaaga agtagaagtc atcatcggga gggccatggg tcttctagtt
     1141 ttgacaggga tcgagaaaga gagaaaaaaa aaaaaaaa
//