LOCUS BC039878 3006 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens fibrous sheath CABYR binding protein, mRNA (cDNA clone
MGC:44906 IMAGE:5163160), complete cds.
ACCESSION BC039878
VERSION BC039878.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3006)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3006)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542510.
FEATURES Location/Qualifiers
source 1..3006
/db_xref="H-InvDB:HIT000052279"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44906 IMAGE:5163160"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3006
/gene="FSCB"
/gene_synonym="DKFZP434F1017"
/db_xref="GeneID:84075"
/db_xref="HGNC:HGNC:20494"
CDS 269..2746
/gene="FSCB"
/gene_synonym="DKFZP434F1017"
/codon_start=1
/product="fibrous sheath CABYR binding protein"
/protein_id="AAH39878.1"
/db_xref="GeneID:84075"
/db_xref="HGNC:HGNC:20494"
/translation="MVGKSQQTDVIEKKKHMAIPKSSSPKATHRIGNTSGSKGSYSAK
AYESIRVSSELQQTWTKRKHGQEMTSKSLQTDTIVEEKKEVKLVEETVVPEEKSADVR
EAAIELPESVQDVEIPPNIPSVQLKMDRSQQTSRTGYWTMMNIPPVEKVDKEQQTYFS
ESEIVVISRPDSSSTKSKEDALKHKSSGKIFASEQPEFQPATNSNEEIGQKNISRTSF
TQETKKGPPVLLEDELREEVTVPVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEE
ATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQ
PPSAEESPSVELLAEILPPSAEESLSEEPPAEILPPPAEKSPSVEPLGEIRSPSAQKA
PIEVQPLPAEGALEEASAKVEPPTVEETLADVQPLLPEEAPREEARELQLSTAMETPA
EEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHAEV
QSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAKG
VSIEEAPLELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQP
PPAEEAPAEVQPPPAEETPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEV
QSLPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADLLLTEEFPIGEASAEVSP
PPSEQTPEDEALVENVSTEFQSPQVAGIPAVKLGSVVLEGEAKFEEVSKINSVLKDLS
NTNDGQAPTLEIESVFHIELKQRPPEL"
BASE COUNT 980 a 692 c 667 g 667 t
ORIGIN
1 cgcttactga ataaggtggg atccaacaag agtgtagtat ggaatgcaat agcttatgaa
61 ttactttttt tctgagggag ctcaacagaa tgacacctaa gaaagggaaa gtctttgaca
121 cttggtacgt ttgtgatttt tggtcattac ttgaaaatta ataagtttga aatcactact
181 cttagaaatg gaagaaagtg atgactctaa tcagcctatc tcagcgtgta ggcaagaaat
241 tcgaaagaga agatgaccca gcaaaccaat ggtaggcaaa tcccagcaaa ctgatgtaat
301 agagaaaaag aaacacatgg ccataccaaa atcatctagc cccaaagcta cccatcgtat
361 tggtaatact tctggaagca aaggcagcta ctctgccaaa gcctatgagt ctattagagt
421 atcttctgag cttcagcaaa cttggacaaa gagaaagcat ggacaggaaa tgactagtaa
481 gtctctccag acagacacca ttgtagaaga gaaaaaagaa gtcaagttag ttgaggaaac
541 cgtggtacct gaagaaaagt cagctgatgt tagagaagct gctattgaat tgccagagag
601 tgttcaggat gtagaaattc caccaaacat accttcagtt caactaaaaa tggacagatc
661 tcagcagacc agccgtacag gatactggac catgatgaac atcccccctg tagaaaaagt
721 ggacaaggaa caacagacat actttagtga atcagaaata gtggttattt ccaggccaga
781 tagttcttct acaaagtcaa aggaagatgc cctgaaacat aaatcgtcgg gaaagatttt
841 tgctagtgaa caacctgaat ttcaaccagc aacaaacagc aatgaagaaa ttgggcagaa
901 aaatatcagc agaacttcat ttactcagga gactaaaaaa ggtcccccgg tacttttaga
961 agatgagctt agggaagaag taactgtacc tgttgtacaa gaaggttctg ctgttaaaaa
1021 agtggcttct gctgaaatag agcctccatc aacagaaaaa ttcccagcta aaatacagcc
1081 tccattagtt gaagaggcca ctgctaaagc ggagcccaga cctgctgaag agacccatgt
1141 ccaagtacag ccatcaactg aagagactcc tgatgctgag gcagccactg cagttgcgga
1201 gaattctgtt aaagttcagc ctccacctgc tgaagaggcc cctttagtgg agtttcctgc
1261 tgaaattcag cctccatcag ctgaagagtc tccttctgta gagcttctgg ctgaaattct
1321 gcctccatca gctgaagagt ccctttcaga agagcctcct gctgaaattc tgcctccacc
1381 agctgaaaag tctccttcag tagagcctct tggtgaaatt cggtctccct cagcacaaaa
1441 ggctcccatt gaagtacagc ctttaccagc tgagggcgcc cttgaagagg cctcagctaa
1501 agtagagcct cccactgttg aagagaccct tgctgatgtt cagcctctat tacctgaaga
1561 ggctcctaga gaagaggctc gagaacttca gctttcaaca gctatggaga cccctgcaga
1621 agaggctcct actgaatttc agtctccatt acctaaagag accactgcag aagaggcctc
1681 tgctgaaatt cagcttctag cagctacgga gcctcctgca gatgaaactc ctgccgaagc
1741 tcggtctcca ctatctgagg agacttctgc agaagaggct catgctgaag ttcaatctcc
1801 attagctgaa gagaccactg cagaagaggc ctctgctgaa attcagcttc tagcagctat
1861 agaggctcct gcagatgaaa ctcctgctga agctcagtct ccactatctg aggagacttc
1921 tgcagaagag gctcctgctg aagttcagtc tccatcagct aagggagttt ctatagaaga
1981 ggcccctctt gagcttcagc ctccatcagg tgaagagacc actgcagaag aggcctctgc
2041 tgcaattcag cttctagcag ctacagaggc ttctgcagaa gaggctcctg ctgaagttca
2101 gcctccacca gctgaggagg cccccgctga agttcagcct ccaccagctg aggaggcccc
2161 cgctgaagtt cagcctccac cagctgagga gacccccgct gaagttcagc ctccaccagc
2221 tgaggaggcc cccgctgaag ttcagcctcc accagctgag gaggcccccg ctgaagttca
2281 gcctccacca gctgaggagg cccctgctga agttcagtct ctaccagctg aggagactcc
2341 tatagaagag acccttgctg cagtacactc tcccccagct gatgatgtcc ctgcagaaga
2401 ggcctccgtt gacaaacatt ccccaccagc tgatttgctt ctgactgagg agtttcctat
2461 aggagaggcc tctgctgaag tttcacctcc accatctgaa caaacccctg aagatgaggc
2521 tctggtagag aatgtgtcta cagaatttca gtcaccgcag gtggcaggaa ttccagcagt
2581 aaaattagga tcggttgttt tggaaggtga agcaaaattt gaagaggttt caaaaatcaa
2641 ttctgtcctt aaagatttgt ctaataccaa tgatggacag gctcccactc ttgaaataga
2701 aagtgttttt catatagaat taaaacaacg tcctcctgaa ctgtagtcag gttgtaccta
2761 agctagcaat cagaagctac atggttttgg aagaacatac tttagaaaag ggtgggcagc
2821 gggaagtagc tttgtcaata aggcaaatta aaggggaccc caagacttgg aatacaggtt
2881 ggaaaatgaa caataaaaac tgtagcagca taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaa
//