LOCUS BC039870 752 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens SPOC domain containing 1, mRNA (cDNA clone
IMAGE:4184930), partial cds.
ACCESSION BC039870
VERSION BC039870.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 752)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 752)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC039870.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: a Column: 10.
FEATURES Location/Qualifiers
source 1..752
/db_xref="H-InvDB:HIT000095932"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4184930"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..752
/gene="SPOCD1"
/gene_synonym="FLJ25348"
/db_xref="GeneID:90853"
CDS <1..546
/gene="SPOCD1"
/gene_synonym="FLJ25348"
/codon_start=1
/product="SPOCD1 protein"
/protein_id="AAH39870.1"
/db_xref="GeneID:90853"
/translation="YLFSTLLLKERYYQPDDRRPNVPLKGTPPPGGAWQQSQGRGSIA
PRGISAWQRPPRGRGRLWPEPENWQHPGRGQWPPEPGLRQSQHPYSVAPAGHGFGRGQ
HFHRDSCPHQALLRHLESLATMSHQLQALLCPQTKSSIPRPLQRLSSALAAPEPPGPA
RDSSLGPTDEAGSECPFPRKA"
BASE COUNT 174 a 231 c 195 g 152 t
ORIGIN
1 tatctcttct ccaccttact gttgaaggag agatactatc agccagatga caggaggccg
61 aatgtgcccc tgaagggcac ccctccccca ggaggtgcct ggcagcagag ccagggcagg
121 ggcagtatag ctccaagggg aatctctgct tggcagaggc cccccagagg cagggggagg
181 ctctggccag agcctgaaaa ctggcagcat cctgggcgag ggcagtggcc cccagagcca
241 ggcttgcgcc agtcccagca tccctattca gtagcaccag ctggtcatgg ctttggccgt
301 ggccagcact tccacaggga ctcctgtccc caccaagccc tgctccggca cctcgaatcc
361 ctggcgacca tgagtcacca gctccaagcc ttactgtgcc cccagaccaa gagctccatc
421 ccccgccctc tgcagcgttt gtctagcgcc cttgcagctc cagagccccc tggcccagcc
481 cgtgactcct ctttggggcc tacagatgaa gctggctctg agtgtccctt ccctagaaag
541 gcctgaccct ccttacccac cagaacaggg gttttgatgc cctcactagt gttgaagcct
601 gttccagaga gaggtgggac tgcaaggaga ggatggtcag ccctacccac ctgccctgtt
661 tgaacttcct gtttgacaat gtttgctgtt gattttttgt tcaataaaga atttggtaaa
721 attggaaaaa aaaaaaaaaa aaaaaaaaaa aa
//