LOCUS BC039867 1895 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens WD repeat domain, phosphoinositide interacting 1, mRNA (cDNA clone MGC:49021 IMAGE:6055425), complete cds. ACCESSION BC039867 VERSION BC039867.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1895) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1895) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC039867.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: o Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37059790. FEATURES Location/Qualifiers source 1..1895 /db_xref="H-InvDB:HIT000052277" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:49021 IMAGE:6055425" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1895 /gene="WIPI1" /gene_synonym="Atg18" /gene_synonym="FLJ10055" /gene_synonym="WIPI49" /db_xref="GeneID:55062" /db_xref="HGNC:HGNC:25471" /db_xref="MIM:609224" CDS 48..1388 /gene="WIPI1" /gene_synonym="Atg18" /gene_synonym="FLJ10055" /gene_synonym="WIPI49" /codon_start=1 /product="WD repeat domain, phosphoinositide interacting 1" /protein_id="AAH39867.1" /db_xref="GeneID:55062" /db_xref="HGNC:HGNC:25471" /db_xref="MIM:609224" /translation="MEAEAADAPPGGVESALSCFSFNQDCTSLAIGTKAGYKLFSLSS VEQLDQVHGSNEIPDVYIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSN ILSIRLNRQRLLVCLEESIYIHNIKDMKLLKTLLDIPANPTGLCALSINHSNSYLAYP GSLTSGEIVLYDGNSLKTVCTIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPD GQKLYEFRRGMKRYVTISSLVFSMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWS GYMGKMFMAATNYLPTQVSDMMHQDRAFATARLNFSGQRNICTLSTIQKLPRLLVASS SGHLYMYNLDPQDGGECVLIKTHSLLGSGTTEENKENDLRPSLPQSYAATVARPSASS ASTVPGYSEDGGALRGEVIPEHEFATGPVCLDDENEFPPIILCRGNQKGKTKQS" BASE COUNT 524 a 456 c 456 g 459 t ORIGIN 1 ggggctgagg tggctgtcgc cggctccgag ctgcggccga gcccccgatg gaggccgagg 61 ccgcggacgc tcccccgggc ggggttgagt cggcgctcag ctgcttctct ttcaaccagg 121 actgcacatc cctagcaatt ggaactaaag ccgggtataa gctgttttct ctgagttctg 181 tggagcagct ggatcaagtc cacggaagca atgaaatccc ggacgtctac atcgtggagc 241 gcctcttctc cagcagcctg gtggtggtag tcagtcacac aaaaccacgg cagatgaacg 301 tgtatcactt caagaaaggc acagagatct gtaattacag ctactccagc aacatcttgt 361 ccataaggct gaaccggcaa aggctgctgg tttgcctaga agagtccatt tatattcaca 421 acattaaaga catgaagctg ttgaagaccc tcctggatat tcctgcaaac ccaacaggtc 481 tatgtgctct ctctatcaac cattccaatt cttacctggc ctatcctgga agcctgactt 541 caggggagat tgtgctttat gatggaaact ccctgaaaac agtctgcact attgctgccc 601 atgagggaac actagctgcc atcaccttca atgcctcagg ctccaaacta gcaagtgcgt 661 ctgaaaaagg cacagtcatc cgggtgttct ctgtccctga tgggcaaaag ctctatgagt 721 tccggagagg gatgaaaagg tatgtgacaa tcagctctct agtgttcagt atggattcac 781 aattcctctg cgcctccagt aacaccgaga cggtacacat cttcaagctg gaacaggtca 841 ccaacagtcg accagaagag ccttcgacct ggagtggcta catgggaaag atgtttatgg 901 ctgctaccaa ctacctccct acccaggtgt cagacatgat gcatcaggac agggcttttg 961 ccactgcacg cttgaacttc tccggacaga ggaacatctg taccctctca acgatccaga 1021 agttgccacg gctgctagtt gcgtcatcca gtggacacct ttatatgtac aatttggatc 1081 ctcaggatgg aggagagtgt gtcttaatca aaacccacag cttgcttggc tcaggaacaa 1141 cagaagagaa taaagaaaat gacctcagac cttccttacc tcagtcttat gcagcgaccg 1201 tagccagacc aagtgcatct tcagcctcca cggtgccagg ttattctgag gacggcgggg 1261 cgctgcgagg agaagttatt cctgaacatg agtttgcgac gggaccagtg tgtcttgatg 1321 atgagaatga gtttcctcct ataatcttgt gccgtggaaa tcagaagggc aaaacgaagc 1381 agtcatgatg agaagcacac ctcagaaatc aggacatccc ccctatcagg tggttttgga 1441 gaaaacaagg aaggcggaag aatggagtgc aattgtgtga gcagaaaggg gggcaggaat 1501 cccgggtgct ccactgctta aaccacagga cctggttaac tcctcaccaa gcttcccacg 1561 accctggttg ccaatgggcg cgggagacat tgtatacaca tcatgctatt taaaatacgt 1621 tcaaactata gtgtaaatgc taattaacca tattggtata taaccggaat tttatattaa 1681 aaggggcctc ctttttaaat atatgccgtg taaaaaatgt acttatagga acatctcttt 1741 gaattgtatt tcttgtatat tacatactta gagagagact cttttagcca ggcaaagtct 1801 tttttggctg tggctggaat aaatcattta ttacttggga gtcccatttt ggacactaat 1861 aataaaatca tggcaatgca aaaaaaaaaa aaaaa //