LOCUS BC039843 2474 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1, mRNA (cDNA clone IMAGE:4508075), partial cds. ACCESSION BC039843 VERSION BC039843.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2474) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2474) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: c Column: 3. FEATURES Location/Qualifiers source 1..2474 /db_xref="H-InvDB:HIT000095917" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4508075" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>2474 /gene="SMARCC1" /gene_synonym="BAF155" /gene_synonym="CRACC1" /gene_synonym="Rsc8" /gene_synonym="SRG3" /gene_synonym="SWI3" /db_xref="GeneID:6599" /db_xref="MIM:601732" CDS 23..>2474 /gene="SMARCC1" /gene_synonym="BAF155" /gene_synonym="CRACC1" /gene_synonym="Rsc8" /gene_synonym="SRG3" /gene_synonym="SWI3" /codon_start=1 /product="SMARCC1 protein" /protein_id="AAH39843.1" /db_xref="GeneID:6599" /db_xref="MIM:601732" /translation="MAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWE SPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFT KLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLV QNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEW LRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIF NEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPP TPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLK KDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQTNHII IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS TACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGL VPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKSKGASAGREWT EQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLA YQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKK VQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVE NETDEGDKAQDGENEKKKK" BASE COUNT 753 a 509 c 656 g 556 t ORIGIN 1 gtggggacga cgggctgcga cgatggccgc agcggcgggc ggcggcgggc cggggacagc 61 ggtaggcgcc acgggctcgg ggattgcggc ggcagccgca ggcctagctg tttatcgacg 121 gaaggatggg ggcccggcca ccaagttttg ggagagcccg gagacggtgt cccagctgga 181 ttcggtgcgg gtctggctgg gcaagcacta caagaagtat gttcatgcgg atgctcctac 241 caataaaaca ctggctgggc tggtggtgca gcttcttcag ttccaggaag atgcctttgg 301 gaagcatgtc accaacccgg ccttcaccaa actccctgca aagtgtttca tggatttcaa 361 agctggaggc gccttatgtc acattcttgg ggctgcttac aagtataaaa atgaacaggg 421 atggcggagg tttgacctac agaacccatc tcgaatggat cgtaatgtgg aaatgtttat 481 gaacattgaa aaaacattgg tgcagaacaa ttgtttgacc agacccaaca tctacctcat 541 tccagacatt gatctgaagt tggctaacaa attgaaagat atcatcaaac gacatcaggg 601 aacatttacg gatgagaagt caaaagcttc ccaccacatt tacccatatt cttcctcaca 661 agacgatgaa gaatggttga gaccggtgat gagaaaagag aagcaagtgt tagtgcattg 721 gggcttttac ccagacagct atgatacttg ggtccatagt aatgatgttg atgctgaaat 781 tgaagatcca ccaattccag aaaaaccatg gaaggttcat gtgaaatgga ttttggacac 841 tgatattttc aatgaatgga tgaatgagga ggattatgag gtggatgaaa ataggaagcc 901 tgtgagtttt cgtcagcgga tttcaaccaa gaatgaagag ccagtcagaa gtccagaaag 961 aagagataga aaagcatcag ctaatgctcg aaagaggaaa cattcgcctt cgcctccccc 1021 tccgacacca acagaatcac ggaagaagag tgggaagaaa ggccaagcta gcctttatgg 1081 gaagcgcaga agtcagaaag aggaagatga gcaagaagat ctaaccaagg atatggaaga 1141 cccaacacct gtacccaata tagaagaagt agtacttccc aaaaatgtga acctaaagaa 1201 agatagtgaa aatacacctg ttaaaggagg aactgtagcg gatctagatg agcaggatga 1261 agaaacagtc acagcaggag gaaaggaaga tgaagatcct gccaaaggtg atcagagtcg 1321 atcagttgac cttggggaag ataatgtgac agagcagacc aatcacatta ttattcctag 1381 ttatgcatca tggtttgatt ataactgtat tcatgtgatt gaacggcgtg ctcttcctga 1441 gttcttcaat ggaaaaaaca aatccaagac tccagaaata tacttggcat atcgaaattt 1501 tatgattgac acgtatcgtc taaaccccca agagtattta actagcactg cttgtcggag 1561 gaacttgact ggagatgtgt gtgctgtgat gagggtccat gcctttttag agcagtgggg 1621 actcgttaat taccaagttg acccggaaag tagacccatg gcaatgggac ctcctcctac 1681 tcctcatttt aatgtattag ctgatacccc ctctgggctt gtgcctctgc atcttcgatc 1741 acctcaggtt cctgctgctc aacagatgct aaattttcct gagaaaaaca aggaaaaacc 1801 agttgatttg cagaactttg gtctccgtac tgacatttac tccaagaaaa cattagcaaa 1861 gagtaagggt gctagtgctg gaagagaatg gactgaacag gagacccttc tactcctgga 1921 ggccctggag atgtacaagg atgattggaa caaagtgtcg gaacatgttg gaagtcgtac 1981 tcaggatgaa tgcatcctcc actttttgag acttcccatt gaggacccat accttgagaa 2041 ttcagatgct tcccttgggc ctttggccta ccagcctgtc cccttcagtc agtcaggaaa 2101 tccagttatg agtactgttg cttttttggc atctgtggtg gaccctcgcg tggcatctgc 2161 tgcagcaaaa gcggctttgg aggagttttc tcgggtccgg gaggaggtac cactggaatt 2221 ggttgaagct catgtcaaga aagtacaaga agcagcacga gcctctggga aagtggatcc 2281 cacctacggt ctggagagca gctgcattgc aggcacaggg cccgatgagc cagagaagct 2341 tgaaggagct gaagaggaaa aaatggaagc cgaccctgat ggtcagcagc ctgaaaaggc 2401 agaaaataaa gtggaaaatg aaacggatga aggtgataaa gcacaagatg gagaaaatga 2461 aaaaaaaaaa aaaa //