LOCUS BC039833 4109 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 44, mRNA (cDNA clone MGC:48792
IMAGE:5535911), complete cds.
ACCESSION BC039833
VERSION BC039833.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4109)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4109)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: g Column: 6.
FEATURES Location/Qualifiers
source 1..4109
/db_xref="H-InvDB:HIT000052263"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48792 IMAGE:5535911"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4109
/gene="RNF44"
/gene_synonym="KIAA1100"
/db_xref="GeneID:22838"
/db_xref="HGNC:HGNC:19180"
CDS 482..1780
/gene="RNF44"
/gene_synonym="KIAA1100"
/codon_start=1
/product="ring finger protein 44"
/protein_id="AAH39833.1"
/db_xref="GeneID:22838"
/db_xref="HGNC:HGNC:19180"
/translation="MRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLA
SPPARDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQ
GPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQAC
TMQQLPVPYQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRL
DNDVDLRGDQPSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRR
LSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEM
ENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQL
LRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE"
BASE COUNT 782 a 1354 c 1099 g 874 t
ORIGIN
1 cggagcctcc cggcgcgccc ccgcgagccc cctcccgtct ggcgcgcgac cccgccgctt
61 cgaatgttgt gaatcaaatg tggggtttgt tacattccgc tgccgccgcg gacagttctt
121 aaagggccag ccgccggctg ccgcgcagac ccagctgcgt cctgcgccgc ctcccgctcc
181 ctgagggcct gggccgagag agactgatcg cgcgtgggcc tcgcgaggca gacgccgtcg
241 ggcggacaac aaagagagag gccccggaag gagccgggct gcccccggac ccgggggtgg
301 ggaggggagc acattgttcc gcagggcggg agctcttaaa ggatccagac aggcaccccc
361 ccctcccccg ccccctgccc agtttggccg tcctagatcg ggaacaaagg agtcaacgtg
421 tggccgggcg gccaaagggt tgtgagtccc ggcccagccc ctccaccccc ctgccccccc
481 gatgcgacca tgggctctgg cagtgactag gtggccaccc tccgcccccg tgggccagcg
541 gcgattctct gcgggacctg gcagcacccc gggccagctc tggggaagcc ctggcctcga
601 gggccccctg gccagcccgc ctgcccggga tgagcgctta ccctcccagc agccgccgtc
661 ccgacctcca cacctccccg tagaggagcg ccgagcctcg gctcctgccg gcgggagccc
721 ccgaatgctg cacccagcca cccagcagag cccgttcatg gttgatctcc acgagcaggt
781 gcaccaggga cctgtccctc tgtcctacac ggtcaccaca gtgacgaccc aaggcttccc
841 cttgcctaca ggccagcaca tccctggctg cagtgcccag cagctcccag catgctccgt
901 gatgttcagt gggcagcatt accccctctg ctgcctcccg cccccgctta tccaggcgtg
961 caccatgcag cagctgcctg tgccctatca ggcctacccc cacctcatct ccagtgacca
1021 ctacatcctg caccccccac caccggcccc acccccccag cccacccaca tggcgcccct
1081 ggggcagttt gtgtctctgc agacccagca ccctcggatg cccctccagc ggctcgacaa
1141 cgacgtggac ctgcgtgggg accagccctc cctgggcagc ttcacctact ccacctctgc
1201 gcctggccca gccctttccc cgtcggtgcc cctgcactac ctgccccacg atccgctgca
1261 ccaggagctg tcctttggtg tgccatattc tcacatgatg ccacggagac tgagcaccca
1321 gagataccgc ctgcagcagc cactgccccc gccgccccca cccccacccc cacctcccta
1381 ctaccccagc ttcctgccct acttcctctc gatgctgcca atgtcaccaa cagcaatggg
1441 gcccaccatc agcctggacc tggacgtgga tgatgtggag atggagaact atgaggccct
1501 cctgaacctg gccgagcggc tgggagatgc caagccccgg ggtctcacca aagcagacat
1561 agagcagctc ccgtcgtacc gctttaaccc ggacagccat cagtcggagc agacgctgtg
1621 tgtggtctgc ttcagtgact tcgaggcgcg gcagctgctc cgagtcctcc cctgcaacca
1681 tgagttccac accaagtgtg ttgacaagtg gttgaaggcc aaccggacgt gtcccatctg
1741 ccgggccgac gcctccgagg tgcccaggga ggctgagtga ggccacgcag ccgcctgccc
1801 gggagaaccc tgcctgaagc tctggaaact tgtgggtggg gcccagggag gatggggagg
1861 gagtggccca ggcctgcccc ttcgctcctg cctgcatttc cagagctggt gccagggtca
1921 gcccagcgag gagtccctgc aataagcccc tgcatttgcc aagctccaaa gactccctcc
1981 ctagtctgcc tgcccgcccg cccgccacgg agctgcctga gtgtccctga tcgggtctcc
2041 ctcctgtgca ccctcaggtc cctccttttc ctgctggcac tgagtgccag gggtccgctc
2101 cctcagtggg gccggtggag atccttggcc ccaggatggg cagacagagc accatcctgg
2161 gtcagaaggt ctcatgctct gaaatggcgt gccctctgcc caggtggcac tgccaggtgc
2221 gtagacagac ggtgtcacga gccatttcct gagccccagg gctgaatccc ccctccttga
2281 ccccgaacag tgaactcagg cagctggctc tgtgttggct gctgtgaggg ctgagtctgg
2341 ttccctaggg gaccctcatc ccaggaacaa cattccagcc ccaccctcag gctggagggc
2401 gtcccagcct aatcccgagc tggggcacac gtatcctgag gggcttgggc catacgggga
2461 gagggagccc tgtgttcccg gtggttgtcc ctcccaggga tgcagccaga cccgtgccca
2521 atctcctctc cctctgttgt tttgcatgaa cgtgaggagc agcagttttt gttcattcat
2581 ttggcccaaa atcacgtgta ggatttgggg atgtggatat ttaagacaat ttcttttttc
2641 ttttggttta ataggggcgg gtatagggac caactgggac cgagtgccca gggggccgag
2701 cacggtcatg ctggccggcc tgcatgcatg cgtgtgccgg gctgggctgg gcggccggcg
2761 gtcgtggggc agggttgggg gtctgtgctc agctgataac tgccatgcac tgtactgcac
2821 acgtccctag agcctaccgg gacccgacgc ttttcagggc atttctccct ccagccaggg
2881 cccaactccc acctgcctgg gcgaatctcc tccaaggaag tcccaggagg atggggacca
2941 ggaaggctgt ggacccccat ctccaggggg ccttcccagc ctgatccctg tcctccaagt
3001 tctggaggag gccgctgtag ggtctggctg agcttcccac ccactttccc tggtcccaat
3061 cctttcttgt cctataccca gctggggttg ctgccctgaa cgaactgcgt gtggggccgg
3121 cacatcctag caggcagccc ctggcgcctg ctgcctcagg gatgctccaa ccaccctcgt
3181 tctcctcgca gtggccctgg ctcccacctc ccgccccagc ctgccgtggg gcccgtcagc
3241 ctggtcccac ccccatggag aacccaaagt cttactgtat ataactccag gtgacgtttc
3301 tatatttata gcagtgttga aaacccacgt gttttacaca gaaccaccct ctccaacccc
3361 tcccttcccg accccaacaa aacgttttca aaccccttac agttcctggg gcaggcggaa
3421 acaggctcac agattgtgtg tcggctgcag cagtgattcc aacaagcagc tattgggggg
3481 gaaacacagc atttaaaaag atcatcatta aaaaacaaga tttatacaac aattacttag
3541 gatgtttgtg atctgccgac cttgctatag atgccatgtt accaatgatt tcctgtggtg
3601 ggggcttgcc attgtttact ctcttattta ccaacttctg gcctaggcat gacagtgggc
3661 accttccccc agccctggct gggcccagcg cctgtgttct gtgttagaaa ggttttatat
3721 atatataaaa ttacatatat atgtagaaat atatgtaatt ttgggggccc tgttccttgc
3781 acattttaca gttacctcat ttttcccatg tatgtatttg agaaaatgct aatatataga
3841 gaaaaaaatg gttcttaaag cttaaatgtg tggttttttc cattccatgg gattcacatt
3901 ggtttgtagc atttaacata actagtatgt tgtattatat atatgtgtat actgattgaa
3961 atttttaaca gatttgtact ttttttaaaa tgaaagttgc tagttctgct tgaccaagta
4021 gtgcaatcat tatttttttt aatattgttg ctgatttcag agggatattc actaataaat
4081 gtatgatgta taccaaaaaa aaaaaaaaa
//