LOCUS BC039742 1633 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens poly(rC) binding protein 1, mRNA (cDNA clone MGC:47561 IMAGE:6061411), complete cds. ACCESSION BC039742 VERSION BC039742.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1633) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1633) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: p Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14141164. FEATURES Location/Qualifiers source 1..1633 /db_xref="H-InvDB:HIT000052249" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47561 IMAGE:6061411" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1633 /gene="PCBP1" /gene_synonym="hnRNP-E1" /gene_synonym="hnRNP-X" /gene_synonym="HNRPE1" /gene_synonym="HNRPX" /db_xref="GeneID:5093" /db_xref="HGNC:HGNC:8647" /db_xref="MIM:601209" CDS 153..1223 /gene="PCBP1" /gene_synonym="hnRNP-E1" /gene_synonym="hnRNP-X" /gene_synonym="HNRPE1" /gene_synonym="HNRPX" /codon_start=1 /product="poly(rC) binding protein 1" /protein_id="AAH39742.1" /db_xref="GeneID:5093" /db_xref="HGNC:HGNC:8647" /db_xref="MIM:601209" /translation="MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESG ARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRL VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVK QICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPP LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDA STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA SISLAQYLINARLSSEKGMGCS" BASE COUNT 430 a 437 c 399 g 367 t ORIGIN 1 ccacgcgtcc gcgcccgctc ccgctcgctc ccgcggccct cgctcgcctc gcgccggcag 61 ttttgggcct acacctcccc tccccccgcc agccgccaaa gacttgacca cgtaacgagc 121 ccaactcccc cgaacgccgc ccgccgctcg ccatggatgc cggtgtgact gaaagtggac 181 taaatgtgac tctcaccatt cggcttctta tgcacggaaa ggaagtagga agcatcattg 241 ggaagaaagg ggagtcggtt aagaggatcc gcgaggagag tggcgcgcgg atcaacatct 301 cggaggggaa ttgtccggag agaatcatca ctctgaccgg ccccaccaat gccatcttta 361 aggctttcgc tatgatcatc gacaagctgg aggaagatat caacagctcc atgaccaaca 421 gtaccgcggc cagcaggccc ccggtcaccc tgaggctggt ggtgccggcc acccagtgcg 481 gctccctgat tgggaaaggc gggtgtaaga tcaaagagat ccgcgagagt acgggggcgc 541 aggtccaggt ggcgggggat atgctgccca actccaccga gcgggccatc accatcgctg 601 gcgtgccgca gtctgtcacc gagtgtgtca agcagatttg cctggtcatg ctggagacgc 661 tctcccagtc tccgcaaggg agagtcatga ccattccgta ccagcccatg ccggccagct 721 ccccagtcat ctgcgcgggc ggccaagatc ggtgcagcga cgctgcgggc tacccccatg 781 ccacccatga cctggaggga ccacctctag atgcctactc gattcaagga caacacacca 841 tttctccgct cgatctggcc aagctgaacc aggtggcaag acaacagtct cactttgcca 901 tgatgcacgg cgggaccgga ttcgccggaa ttgactccag ctctccagag gtgaaaggct 961 attgggcaag tttggatgca tctactcaaa ccacccatga actcaccatt ccaaataact 1021 taattggctg cataatcggg cgccaaggcg ccaacattaa tgagatccgc cagatgtccg 1081 gggcccagat caaaattgcc aacccagtgg aaggctcctc tggtaggcag gttactatca 1141 ctggctctgc tgccagtatt agtctggccc agtatctaat caatgccagg ctttcctctg 1201 agaagggcat ggggtgcagc tagaacagtg taggttccct caataacccc tttctgctgt 1261 tctcccatga tccaactgtg taatttctgg tcagtgattc caggttttaa ataatttgta 1321 agtgttcagt ttctacacaa ctttatcatc cgctaagaat ttaaaaatca cattctctgt 1381 tcagctgtta atgctgggat ccatatttag ttttataagc ttttccctgt ttttagtttt 1441 gttttgggtt ttttggctca tgaattttat ttctgtttgt cgataagaaa tgtaagagtg 1501 gaatgttaat aaatttcagt ttagttctgt aatgtcaaga atttaagaat taaaaaacgg 1561 attggttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1621 aaaaaaaaaa aaa //