LOCUS BC039727 2200 bp mRNA linear HUM 30-MAR-2005
DEFINITION Homo sapiens sushi, von Willebrand factor type A, EGF and pentraxin
domain containing 1, mRNA (cDNA clone IMAGE:5752476).
ACCESSION BC039727
VERSION BC039727.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2200)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2200)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2200
/db_xref="H-InvDB:HIT000095896"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5752476"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 599 a 554 c 520 g 527 t
ORIGIN
1 cttcgcccac gctggacgaa tcatccacca ggaagacaag ctccaggcgc tcgctgagct
61 cccgcagcag ccgcacgcgt cgccggaacg cctggcccag ccgctccact ctgctccccg
121 ccgcttcgtc gccaggagcg ggcggcgcgg ggatactccc gggggccccg ggcgcggtct
181 cggggaagag gcggaagctg aaattgcgcg acggggacat ctgctgaaag gtcgcccagc
241 ccgaaacgag cgccagaccc cagcaacaaa aggccaggcg aggccacatc gcgctggaga
301 cagagcggct gccccggagc gcaggcggcg gctcgggcgg gaagaggcgc tgggcggccg
361 gactcgcaga ggggcgtgcg cggagctggg cgcggggcag cggccaagag cctcagcgcc
421 ctttcatctg acactgggga cagacacaat ccagactcct cagcagctcg ggaactccgg
481 agggaacggc gcgcgctctc tacccctctc gctctcctct ttttttcttc cctctctcct
541 cctcctctct ctccctgaag cctataaaat gtttgaagga aagggggcag tcaagaaaaa
601 tctcccgctt ccctccttct ctccctctct ccctctcccc gctcctgtct actttctgta
661 tctgtgactc tatctccctc ctccccctct cattctcctc ccgggatcaa gccaaaggct
721 cggagattcc atgacaccag aaccccgcgt ctgtcaggct gtcaacattc ccgcagcaag
781 cgcaccagcg ccgaagccct gattgatccc atatgtctgg caggagctgc agaggaattc
841 actggagatg gatccagata ccgagagtgc cacagtaatt ggaaacactt tgtagacgaa
901 aacatacacg cggactggcc agggagttga aagcatcctt tgaaaactgc ttgctcacct
961 tttgtgtttc ttttccccca ttcagtgtcc caaagccctc gccaaataga tgattgtaca
1021 attttcctga tggggatttc taatcagtgg tgtgtgtgag cgtgcagatt aagcccttaa
1081 gggccccctc agatcacacc ataaaggagt tgcatctaac cttatgcgtt ccacaggaat
1141 gatttgtcat ggtacttcag tcgtgcattt attcattcat ctgtttgttc attctttcct
1201 gattttaaca aatatttttt gaatacccat tgtgtgccag gaactatgtg aggcactgca
1261 aatataagga acaaaaattg acagggattc tatcctcaat gaacttaaag ggtaacaagt
1321 gaggtgacca ttaaccagat attaacatac aaaatatatg taattacaag tgaccatgct
1381 aaataaagga gagcttaggt agacagactt gaccttggag aggccagaga agccttctct
1441 gaggacggaa agtttgtgct gaagtctgaa gtgtaagtag ggggtcccca gtcccctttc
1501 atgtgttctt gatctatttc aacagataag atccacctgg ctttaagtgg tacctggcat
1561 atatctgctt tgaaacaagt tgctacctgg ggtggttttt ccaaagcaag acctccaaag
1621 gggagagcgc acgtgtaaag aaaaggtgca ctttgcatga gggtggggcc tttggttaaa
1681 agattccagc tgggagtcag gaacaccgtg taggtaagcc tacggttatg taaaccacct
1741 gaactgagtc acttccaatc cttggctcag catcagtatc tatttcatga tggaattcag
1801 tgatctcagt ttcctctgtt tctaatagtg aatgatttaa ctccgtctgt atttaacaaa
1861 atactttcag tgacaagtat cacaatgtat tgtgtaacat gttagggctc tggcatcagt
1921 tttcctggac gaaatcatga ctctgccatt tattagttgt acagccttga ctcagtttgt
1981 tcatttgtaa aatggagtaa taacgataac atattaaggg ctgtcataag gattaagtca
2041 taaaaaagta aaattcttag gacaatgctt ggagcatagc gtgtactcaa taaatgctgg
2101 ctggttgctc ttattgccac ctttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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