LOCUS BC039692 4583 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens solute carrier family 7 (cationic
amino acid transporter, y+ system), member 5, mRNA (cDNA clone
MGC:45311 IMAGE:5551612), complete cds.
ACCESSION BC039692
VERSION BC039692.2
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 4583)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4583)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC039692.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: l Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40353749.
FEATURES Location/Qualifiers
source 1..4583
/db_xref="H-InvDB:HIT000052228"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Lymph, lymphoma"
/db_xref="taxon:32630"
/clone="MGC:45311 IMAGE:5551612"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4583
/gene="SLC7A5"
/gene_synonym="4F2LC"
/gene_synonym="CD98"
/gene_synonym="D16S469E"
/gene_synonym="E16"
/gene_synonym="hLAT1"
/gene_synonym="LAT1"
/gene_synonym="MPE16"
/db_xref="GeneID:8140"
/db_xref="HGNC:HGNC:11063"
/db_xref="MIM:600182"
CDS 98..1621
/gene="SLC7A5"
/gene_synonym="4F2LC"
/gene_synonym="CD98"
/gene_synonym="D16S469E"
/gene_synonym="E16"
/gene_synonym="hLAT1"
/gene_synonym="LAT1"
/gene_synonym="MPE16"
/codon_start=1
/transl_table=11
/product="solute carrier family 7 (cationic amino acid
transporter, y+ system), member 5"
/protein_id="AAH39692.1"
/db_xref="GeneID:8140"
/db_xref="HGNC:HGNC:11063"
/db_xref="MIM:600182"
/translation="MAGAGPKRRALAAPAAEEKEEAREKMLAAKSADGSAPAGEGEGV
TLQRNITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACGVFSIVGALC
YAELGTTISKSGGDYAYMLEVYGSLPAFLKLWIELLIIRPSSQYIVALVFATYLLKPL
FPTCPVPEEAAKLVACLCVLLLTAVNCYSVKAATRVQDAFAAAKLLALALIILLGFVQ
IGKGVVSNLDPNFSFEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMINPYRNLPL
AIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGNYHLGVMSWIIPVFVGLS
CFGSVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFTCVMTLLYAFSKD
IFSVINFFSFFNWLCVALAIIGMIWLRHRKPELERPIKVNLALPVFFILACLFLIAVS
FWKTPVECGIGFTIILSGLPVYFFGVWWKNKPKWLLQGIFSTTVLCQKLMQVVPQET"
BASE COUNT 785 a 1479 c 1315 g 1004 t
ORIGIN
1 ggacgcgtgg gtcgacccac gcgtccggcg ggcggcgcgc acactgctcg ctgggccgcg
61 gctcccgggt gtcccaggcc cggccggtgc gcagagcatg gcgggtgcgg gcccgaagcg
121 gcgcgcgcta gcggcgccgg cggccgagga gaaggaagag gcgcgggaga agatgctggc
181 cgccaagagc gcggacggct cggcgccggc aggcgagggc gagggcgtga ccctgcagcg
241 gaacatcacg ctgctcaacg gcgtggccat catcgtgggg accattatcg gctcgggcat
301 cttcgtgacg cccacgggcg tgctcaagga ggcaggctcg ccggggctgg cgctggtggt
361 gtgggccgcg tgcggcgtct tctccatcgt gggcgcgctc tgctacgcgg agctcggcac
421 caccatctcc aaatcgggcg gagactacgc ctacatgctg gaggtctacg gctcgctgcc
481 cgccttcctc aagctctgga tcgagctgct catcatccgg ccttcatcgc agtacatcgt
541 ggccctggtc ttcgccacct acctgctcaa gccgctcttc cccacctgcc cggtgcccga
601 ggaggcagcc aagctcgtgg cctgcctctg cgtgctgctg ctcacggccg tgaactgcta
661 cagcgtgaag gccgccaccc gggtccagga tgcctttgcc gccgccaagc tcctggccct
721 ggccctgatc atcctgctgg gcttcgtcca gatcgggaag ggtgttgtgt ccaatctaga
781 tcccaacttc tcatttgaag gcaccaaact ggatgtgggg aacattgtgc tggcattata
841 cagcggcctc tttgcctatg gaggatggaa ttacttgaat ttcgtcacag aggaaatgat
901 caacccctac agaaacctgc ccctggccat catcatctcc ctgcccatcg tgacgctggt
961 gtacgtgctg accaacctgg cctacttcac caccctgtcc accgagcaga tgctgtcgtc
1021 cgaggccgtg gccgtggact tcgggaacta tcacctgggc gtcatgtcct ggatcatccc
1081 cgtcttcgtg ggcctgtcct gcttcggctc cgtcaatggg tccctgttca catcctccag
1141 gctcttcttc gtggggtccc gggaaggcca cctgccctcc atcctctcca tgatccaccc
1201 acagctcctc acccccgtgc cgtccctcgt gttcacgtgt gtgatgacgc tgctctacgc
1261 cttctccaag gacatcttct ccgtcatcaa cttcttcagc ttcttcaact ggctctgcgt
1321 ggccctggcc atcatcggca tgatctggct gcgccacaga aagcctgagc ttgagcggcc
1381 catcaaggtg aacctggccc tgcctgtgtt cttcatcctg gcctgcctct tcctgatcgc
1441 cgtctccttc tggaagacac ccgtggagtg tggcatcggc ttcaccatca tcctcagcgg
1501 gctgcccgtc tacttcttcg gggtctggtg gaaaaacaag cccaagtggc tcctccaggg
1561 catcttctcc acgaccgtcc tgtgtcagaa gctcatgcag gtggtccccc aggagacata
1621 gccaggaggc cgagtggctg ccggaggagc atgcgcagag gccagttaaa gtagatcacc
1681 tcctcgaacc cactccggtt ccccgcaacc cacagctcag ctgcccatcc cagtccctcg
1741 ccgtccctcc caggtcgggc agtggaggct gctgtgaaaa ctctggtacg aatctcatcc
1801 ctcaactgag ggccagggac aggtgtgcct gtgctcctgc ccaggagcag cttttggtct
1861 ccttgggccc tttttccctt ccctcctttg tttacttata tatatatatt ttttaaactt
1921 aaattttggg tcaacttgac accactaaga tgatttttta aggagctggg ggaaggcagg
1981 agccttcctt tctcctgccc caagggccca gaccctgggc aaacagagct actgagactt
2041 ggaacctcat tgctaccaca gacttgcact gaagccggac agctgcccag acacatgggc
2101 ttgtgacatt cgtgaaaacc aaccctgtgg gcttatgtct ctgccttagg gtttgcagag
2161 tggaaactca gccgtagggt ggcactggga gggggtgggg gatctgggca aggtgggtga
2221 ttcctcccag gaggtgcttg aggccccgat ggactcctga ccataatcct agccccgaga
2281 caccatcctg agccagggaa cagccccagg gttggggggt gccggcatct cccctagctc
2341 accaggcctg gcctctgggc agtgtggcct cttggctatt tctgtgtcca gttttggagg
2401 ctgagttctg gttcatgcag acaaagccct gtccttcagt cttctagaaa cagagacaag
2461 aaaggcagac acaccgcggc caggcaccca tgtgggcgcc caacctgggc tccacacagc
2521 agtgtcccct gccccagagg tcgcagctac cctcagcctc caatgcattg gcctctgtac
2581 cgcccggcag ccccttctgg ccggtgctgg gttcccactc ccggcctagg cacctccccg
2641 ctctccctgt cacgctcatg tcctgtcctg gtcctgatgc ccgttgtcta ggagacagag
2701 ccaagcactg ctcacgtctc tgccgcctgc gtttggaggc ccctgggctc tcacccagtc
2761 cccacccgcc tgcagagagg gaactagggc accccttgtt tctgttgttc ccgtgaattt
2821 ttttcgctat gggaggcagc cgaggcctgg ccaatgcggc ccactttcct gagctgtcgc
2881 tgcctccatg gcagcagcca aggaccccca gaacaagaag acccccccgc aggatccctc
2941 ctgagctcgg ggggctctgc cttctcaggc cccgggcttc ccttctcccc agccagaggt
3001 ggagccaagt ggtccagcgt cactccagtg ctcagctgtg gctggaggag ctggcctgtg
3061 gcacagccct gagtgtccca agccgggagc caacgaagcc ggacacggct tcactgacca
3121 gcggctgctc aagccgcaag ctctcagcaa gtgcccagtg gagcctgccg cccccacctg
3181 ggcaccggga ccccctcacc atccagtggg cccggagaaa cctgatgaac agtttgggga
3241 ctcaggacca gatgtccgtc tctcttgctt gaggaatgaa gacctttatt cacccctgcc
3301 ccgttgcttc ccgctgcaca tggacagact tcacagcgtc tgctcatagg acctgcatcc
3361 ttcctgggga cgaattccac tcgtccaagg gacagcccac ggtctggagg ccgaggacca
3421 ccagcaggca ggtggactga ctgtgttggg caagacctct tccctctggg cctgttctct
3481 tggctgcaaa taaggacagc agctggtgcc ccacctgcct ggtgcattgc tgtgtgaatc
3541 caggaggcag tggacatcgt aggcagccac ggccccgggt ccaggagaag tgctccctgg
3601 aggcacgcac cactgcttcc cactggggcc ggcggggccc acgcacgacg tcagcctctt
3661 accttcccgc ctcggctagg ggtcctcggg atgccgttct gttccaacct cctgctctgg
3721 gaggtggaca tgcctcaagg atacagggag ccggcggcct ctcgacggca cgcacttgcc
3781 tgttggctgc tgcggctgtg ggcgagcatg ggggctgcca gcgtctgttg tggaaagtag
3841 ctgctagtga aatggctggg gccgctgggg tccgtcttca cactgcgcag gtctcttctg
3901 ggcgtctgag ctggggtggg agctcctccg cagaaggttg gtggggggtc cagtctgtga
3961 tccttggtgc tgtgtgcccc actccagcct ggggacccca cttcagaagg taggggccgt
4021 gtcccgcggt gctgactgag gcctgcttcc ccctccccct cctgctgtgc tggaattcca
4081 cagggaccag ggccaccgca ggggactgtc tcagaagact tgatttttcc gtcccttttt
4141 ctccacactc cactgacaaa cgtccccagc ggtttccact tgtgggcttc aggtgttttc
4201 aagcacaacc caccacaaca agcaagtgca ttttcagtcg ttgtgctttt ttgttttgtg
4261 ctaacgtctt actaatttaa agatgctgtc ggcaccatgt ttatttattt ccagtggtca
4321 tgctcagcct tgctgctctg cgtggcgcag gtgccatgcc tgctccctgt ctgtgtccca
4381 gccacgcagg gccatccact gtgacgtcgg ccgaccaggc tggacaccct ctgccgagta
4441 atgacgtgtg tggctgggac cttctttatt ctgtgttaat ggctaacctg ttacactggg
4501 ctgggttggg tagggtgttc tggctttttt gtggggtttt tatttttaaa gaaacactca
4561 atcatcctaa aaaaaaaaaa aaa
//