LOCUS BC039689 1863 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 43, member A, mRNA
(cDNA clone MGC:29738 IMAGE:4906944), complete cds.
ACCESSION BC039689
VERSION BC039689.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1863)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1863)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC039689.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45333897.
FEATURES Location/Qualifiers
source 1..1863
/db_xref="H-InvDB:HIT000052227"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29738 IMAGE:4906944"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1863
/gene="FAM43A"
/gene_synonym="FLJ90022"
/db_xref="GeneID:131583"
/db_xref="HGNC:HGNC:26888"
CDS 144..1415
/gene="FAM43A"
/gene_synonym="FLJ90022"
/codon_start=1
/product="family with sequence similarity 43, member A"
/protein_id="AAH39689.1"
/db_xref="GeneID:131583"
/db_xref="HGNC:HGNC:26888"
/translation="MLPWKKHKFELLAEAPPRQASKPKGYAVSLHYSALSSLARACPE
GALSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIWSKSEA
GRQGTKMKLTVSAQGIRMVHAEERALRRPGHLYLLHRVTYCVADARLPKVFAWVYRHE
LKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALAEFKRLKRRDDARHQQQELVGA
HTIPLVPLRKLLLHGPCCYKPPVERSRSAPKLGSITEDLLGEQLEQELQEEEEEEQPE
GCPEEEENRAAEGDPAEEEAEAQRALVVAMHFECGDLLDTLENGRGEALGGGGGSLGP
GAGPPPLLLGSASDMKAELSQLISDLGELSFGNDVRTLQADLRVTRLLSGDSTGSESS
IEGGGPDATSATAGDSSRQADGASADEPHSG"
BASE COUNT 322 a 627 c 640 g 274 t
ORIGIN
1 ctccctacca cagggccgct cccagtagtt ttattcttcg atcttgcccg ggccgagcct
61 ggcaggggcc ggtggctcag cgggcctcgc acccggcgct ccgccgccgc cgccgcccag
121 ctgcgccggg gcgccctccg gagatgctgc cgtggaagaa gcacaagttc gagctgctgg
181 ccgaggcgcc gccgcggcag gcgtccaagc ccaagggcta cgctgtgagc ctgcactact
241 cggcgctcag ctcgctggcg cgggcgtgcc ccgaaggcgc gcttagccgg gtgggcagca
301 tgttccgctc caagcgcaag aagctgcaca tcactagcga ggacccaact tacaccgtgc
361 tctacctggg caatgccacc accatccagg cgcgcggcga cggctgcacc gaccttgctg
421 tgggcaagat ctggagcaag agcgaggcgg gccgtcaggg caccaagatg aagctgacgg
481 tgagtgcgca gggtatccgc atggtgcacg ccgaggagcg cgcgctgcgc cgcccgggcc
541 acctctacct gctgcaccgc gtcacctact gcgtggccga cgcgcggctg cccaaggtct
601 tcgcctgggt gtaccggcac gagctgaagc acaaggccgt gatgctgcgc tgccacgccg
661 tgctggtgtc caagcccgaa aaggcgcagg ccatggccct gctgctctac cagacgtcgg
721 ccaacgcgct ggcggaattt aaacgcctca agcggcggga cgacgcgcgt caccagcagc
781 aggagctggt gggcgcacac accatcccgc tagtgccgct gcgcaagctg ctcctacacg
841 gaccctgctg ctataaaccg ccggtggagc gcagccgcag cgcgcccaag cttggctcca
901 tcaccgagga cctgctcggc gaacagctgg agcaggagct gcaggaggaa gaggaagagg
961 agcaacccga gggctgcccg gaggaggagg agaaccgtgc ggcagaggga gatccagcag
1021 aggaggaggc cgaggcgcag cgtgcgctag tggtcgccat gcactttgag tgcggggact
1081 tgttggatac tctggagaat ggccgtgggg aggcgctagg aggcggcggg ggctccctgg
1141 gcccgggggc cgggccgccg cctctgctgc tgggcagcgc ctccgacatg aaggctgagc
1201 tgtcgcaact tattagcgac ctgggcgagc tcagcttcgg caacgacgtg cgcaccctgc
1261 aggccgactt gcgggtgacg cgcctgctgt cgggcgacag cacgggcagc gagagctcca
1321 tcgagggcgg gggccctgac gccacctccg ccaccgccgg ggactcgtcc cgccaggccg
1381 acggcgccag tgcagacgag ccccactcgg gctgagctcc tccgcgcgtc gccggcgctc
1441 caccgtggct acccatccgt ggtcccgaca acctccctgt cccttgcccg cccccaggaa
1501 gggggaaatg gggcatttgg ggcccagacc tacacttgga gcccaggtcc agcgttcccc
1561 cgaccgcttt cccctacctc ccggcccccg ctcccgcccc agcacttttg gctctgttgc
1621 gcgtggggat gcggggagat ttgagagggg aaaaccccgc caggagggag agagaggcac
1681 ccctctggga tgcgggtgag ggaaggttgg ctgaagttcc tagtctcagg ccgtaggtgc
1741 ctggccagtt tcctgtttgt ggggcagctg gggcctgagg aggaggggtt cacttcctcc
1801 tcccaccccc tgggagcggc cctgcgctgt cactgacatc tcattaaaaa aaaaaaaaaa
1861 aaa
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