LOCUS BC039669 1106 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 53, mRNA (cDNA clone
MGC:50104 IMAGE:5167284), complete cds.
ACCESSION BC039669
VERSION BC039669.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1106)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1106)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 87 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38348309.
FEATURES Location/Qualifiers
source 1..1106
/db_xref="H-InvDB:HIT000052226"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50104 IMAGE:5167284"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1106
/gene="C11orf53"
/gene_synonym="MGC50104"
/db_xref="GeneID:341032"
/db_xref="HGNC:HGNC:30527"
CDS 148..858
/gene="C11orf53"
/gene_synonym="MGC50104"
/codon_start=1
/product="chromosome 11 open reading frame 53"
/protein_id="AAH39669.1"
/db_xref="GeneID:341032"
/db_xref="HGNC:HGNC:30527"
/translation="MPGSPVTSGYYGVRRSFLSDSDFHNSKQFSNDVYTSSVGKPFPC
ESSAGQSHAALLEPYFPQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPFPGDPAHFL
FRDSWEQTLPDGLSQPDPVSADALLTLPPSTSCLSQLESGSIAQHRGSSWGSSLAGAQ
SYSLHALEDLHHTPGYPTPPPYPFTPFMTVSNDLPPKVGPLSPDEEADTGSLHDPSPW
VKEDGSIAWGSYECRRAY"
BASE COUNT 284 a 319 c 261 g 242 t
ORIGIN
1 gtcccaggag actacagcaa acgagtgtat caaggagtga gagtgaagca tacagtcaaa
61 gatctcctgg cagaaaaacg atccgggcag acaagtaact caagacttaa tggcagcgtc
121 agttcctctc agtctccatt tgtgcagatg ccaggttcgc cggtcacgtc aggttactac
181 ggtgtcagaa gatctttctt atctgactca gacttccaca acagtaaaca gttttcaaat
241 gacgtctaca cctccagcgt ggggaagccg tttccctgtg agtcctccgc agggcagagc
301 catgcggctc tcctggagcc ctacttcccc caggagccct acggagacta ccggcctccg
361 gcgctgacgc ccaacgcggg ctctctgttc agcgcctcgc ccctaccgcc gctcctgcca
421 ccgcccttcc ccggagaccc agctcacttc ctatttaggg actcatggga gcagacgttg
481 cctgacggtc tcagccagcc tgaccctgtg tctgccgatg ccctgctgac cttgccaccc
541 agcacgagtt gcctctccca gcttgagtcc gggagcatcg cccagcacag gggctcaagc
601 tgggggtcat ccctggctgg ggctcagtca tactcgctgc atgctctgga agatctgcac
661 cacactccgg ggtaccctac cccgcctcct taccccttca cccctttcat gacggtgtca
721 aatgacctac cgcccaaggt ggggccactc tccccagatg aggaagcaga caccggttcc
781 ctccatgacc cttccccttg ggtgaaagaa gatgggagta ttgcctgggg gtcatatgaa
841 tgccgcagag cttattgagg ggagggccaa atgacttctg ggtttttctt taacttgagg
901 tgtattccaa agatcgtttt aggtgtgtca gcccattcag gactggattt tcagaataag
961 cctcaatgct gctctttgtt agtggacgag ggcatttatt tgtaatcctc tccactgtaa
1021 ccccactgaa ataaaacaga atgttaatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaaa
//